Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.34□□□□□ -1.87
CCSER1Q9C0I3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.34□□□□□ -1.87
CCSER1Q9C0I3 RNA5SP380-201ENST00000517190 98 ntBASIC3.34□□□□□ -1.87
CCSER1Q9C0I3 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.34□□□□□ -1.87
CCSER1Q9C0I3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCSER1Q9C0I3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.34□□□□□ -1.87
CCSER1Q9C0I3 ERHP1-201ENST00000523006 310 ntBASIC3.34□□□□□ -1.87
CCSER1Q9C0I3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCSER1Q9C0I3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.34□□□□□ -1.87
CCSER1Q9C0I3 YWHAZP1-201ENST00000556286 722 ntBASIC3.34□□□□□ -1.87
CCSER1Q9C0I3 AP005205.1-201ENST00000563503 508 ntBASIC3.34□□□□□ -1.87
CCSER1Q9C0I3 AC034105.3-201ENST00000565294 442 ntBASIC3.34□□□□□ -1.87
CCSER1Q9C0I3 AC055876.1-202ENST00000567053 138 ntBASIC3.34□□□□□ -1.87
CCSER1Q9C0I3 BDH2P1-201ENST00000602288 736 ntBASIC3.34□□□□□ -1.87
CCSER1Q9C0I3 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.34□□□□□ -1.87
CCSER1Q9C0I3 AC002076.2-201ENST00000617362 122 ntBASIC3.34□□□□□ -1.87
CCSER1Q9C0I3 AC006111.3-201ENST00000622137 383 ntBASIC3.34□□□□□ -1.87
CCSER1Q9C0I3 AL356585.4-201ENST00000623078 1229 ntBASIC3.34□□□□□ -1.87
CCSER1Q9C0I3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.34□□□□□ -1.87
CCSER1Q9C0I3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.34□□□□□ -1.87
CCSER1Q9C0I3 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CCSER1Q9C0I3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.34□□□□□ -1.88
CCSER1Q9C0I3 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CCSER1Q9C0I3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCSER1Q9C0I3 ZNF833P-201ENST00000424938 1494 ntBASIC3.34□□□□□ -1.88
CCSER1Q9C0I3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCSER1Q9C0I3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 SNORD65.1-201ENST00000390889 71 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 U3.42-201ENST00000408746 214 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 HSPE1P1-201ENST00000421494 318 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 RPL7P46-201ENST00000425129 740 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 AC233728.2-201ENST00000425348 757 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 AL589880.1-201ENST00000448271 287 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 AC093392.2-201ENST00000450682 337 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 USP9YP34-201ENST00000453983 808 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 SUMO2P2-201ENST00000456482 255 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 RPL21P8-201ENST00000465083 535 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 AC068724.1-201ENST00000487100 792 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 OR2A20P-203ENST00000498397 1268 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 SUMO2P5-201ENST00000506790 245 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 OR5G4P-201ENST00000525251 760 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 AC125611.1-201ENST00000549563 229 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 AC069545.1-201ENST00000605671 358 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 AC008962.1-201ENST00000605729 304 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 AC080013.4-201ENST00000607624 649 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 AL451074.6-201ENST00000608512 729 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 AC010975.3-201ENST00000618727 978 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 AL445984.1-201ENST00000637834 659 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 AC013437.2-201ENST00000639587 677 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 AL353743.1-202ENST00000431724 1695 ntBASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCSER1Q9C0I3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 GABRG2-229ENST00000641017 3628 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 MIR422A-201ENST00000362286 90 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 RNU5D-1-201ENST00000363299 116 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 RNU6-298P-201ENST00000390888 96 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 SNORA48.2-201ENST00000390926 124 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 RPS15AP38-201ENST00000413110 372 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 GTF2IP7-202ENST00000436677 309 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 AC093155.1-201ENST00000440164 826 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 RPL21P41-201ENST00000459863 264 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 AC104982.1-201ENST00000478775 574 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 AC079203.1-201ENST00000487972 404 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 AC118282.1-201ENST00000506408 765 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 AC022690.1-201ENST00000526681 550 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 AP002404.1-201ENST00000532005 451 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 SETP7-201ENST00000552169 453 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms