Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 PSMA2P3-201ENST00000429685 675 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 ELOCP18-201ENST00000434209 337 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 RAC1P7-201ENST00000445367 377 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 UBE2V1P7-201ENST00000446395 340 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 MTND1P11-201ENST00000456661 876 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AC022364.2-201ENST00000457963 554 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AC083829.1-201ENST00000503756 657 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AC139783.2-201ENST00000504847 1145 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AC021146.1-201ENST00000511202 716 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AC093840.1-201ENST00000511599 336 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 RN7SKP122-201ENST00000515923 296 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 PTP4A1P6-201ENST00000531034 478 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 CBX3P5-201ENST00000552017 521 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 OR4T1P-201ENST00000554933 911 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AC098848.2-201ENST00000588023 330 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AC067852.4-201ENST00000590314 478 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 Z98200.1-201ENST00000607298 470 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 MIR7703-201ENST00000620784 77 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 YWHAEP7-203ENST00000622054 312 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 AC022140.2-201ENST00000623500 188 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 BMS1P21-201ENST00000634565 365 ntBASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
AMBRA1Q9C0C7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 OR1S2-201ENST00000302592 978 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 RNY3P3-201ENST00000363816 102 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 SNORA71.2-201ENST00000364941 134 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 RNY3P13-201ENST00000365542 102 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 RNU6-339P-201ENST00000384310 107 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 SNORD51-201ENST00000384320 80 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 RNU6-278P-201ENST00000390945 109 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 RNU6-1158P-201ENST00000391167 107 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 RNA5SP397-201ENST00000391323 118 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 AL356776.1-201ENST00000406574 447 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 RPS23P10-201ENST00000416185 486 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 RPS12P5-201ENST00000423449 371 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 SEPT14P3-201ENST00000439401 183 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 MTND4LP16-201ENST00000440828 295 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 RPL23AP93-201ENST00000440847 484 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 BNIP3P2-201ENST00000441221 577 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 AL732372.2-207ENST00000445840 183 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 AC079781.2-201ENST00000446424 169 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 AL451050.1-201ENST00000450126 415 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 SEPT14P2-201ENST00000453405 183 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 RPL37P6-202ENST00000464216 403 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 AC053481.1-201ENST00000467217 306 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 AL139099.1-201ENST00000497398 403 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 AC114786.4-201ENST00000508771 728 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 PARP4P3-201ENST00000510265 317 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 SEPT14P4-201ENST00000513445 186 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 LRRC34P2-201ENST00000514850 553 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 FO082796.1-201ENST00000523795 183 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 OR4R1P-201ENST00000529879 463 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 PDCD5P1-201ENST00000543528 309 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 HMGB1P6-201ENST00000569046 646 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 AL451044.1-201ENST00000604867 238 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms