Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL135786.1-201ENST00000415892 214 ntBASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 Z96811.1-201ENST00000445880 108 ntBASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 IFNA11P-201ENST00000446352 526 ntBASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 AC009961.3-201ENST00000449832 765 ntBASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 RPS23P3-201ENST00000470993 430 ntBASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 DNAJC8P1-201ENST00000554535 372 ntBASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 AC061975.8-201ENST00000587058 721 ntBASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 AC018926.3-201ENST00000618841 406 ntBASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 AC079228.1-201ENST00000624774 1049 ntBASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 Z82195.2-201ENST00000612348 18351 ntBASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 MTCO1P9-201ENST00000505577 1534 ntBASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 RNA5SP456-201ENST00000364002 114 ntBASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 MIR518C-201ENST00000384822 101 ntBASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 RNA5SP425-201ENST00000410336 112 ntBASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 BX682237.1-201ENST00000415016 335 ntBASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 AC098826.1-201ENST00000433943 471 ntBASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 RPS12P2-201ENST00000439728 269 ntBASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 UBBP3-201ENST00000445497 241 ntBASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 AC104058.1-201ENST00000448028 297 ntBASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 RPS3P1-201ENST00000456781 192 ntBASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 RPS29P21-201ENST00000496272 170 ntBASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 RN7SKP24-201ENST00000515888 284 ntBASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 AC022690.1-201ENST00000526681 550 ntBASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 AL391156.1-201ENST00000554965 554 ntBASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 CTSLP2-204ENST00000629029 392 ntBASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
UPF3BQ9BZI7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 MIR6073-201ENST00000352083 89 ntBASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 SSXP10-201ENST00000402595 565 ntBASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 ATF1P1-201ENST00000406040 927 ntBASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 AC107081.1-201ENST00000414975 361 ntBASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 MTCYBP34-201ENST00000439552 670 ntBASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 RPL23AP58-201ENST00000440453 469 ntBASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 AC068135.1-201ENST00000446164 246 ntBASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 AC004062.1-201ENST00000509926 645 ntBASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 RNU6-488P-201ENST00000515918 99 ntBASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 AC008962.1-201ENST00000605729 304 ntBASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 HSPE1P14-201ENST00000605812 302 ntBASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 AL138880.2-201ENST00000616214 239 ntBASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 AC010297.1-201ENST00000623948 149 ntBASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.92□□□□□ -1.94
UPF3BQ9BZI7 ZNF72P-201ENST00000425869 1908 ntBASIC2.91□□□□□ -1.94
UPF3BQ9BZI7 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
UPF3BQ9BZI7 RNU1-51P-201ENST00000365345 176 ntBASIC2.91□□□□□ -1.94
UPF3BQ9BZI7 MIR27B-201ENST00000385129 97 ntBASIC2.91□□□□□ -1.94
UPF3BQ9BZI7 RNA5SP181-201ENST00000410246 98 ntBASIC2.91□□□□□ -1.94
UPF3BQ9BZI7 AL158825.1-201ENST00000414735 521 ntBASIC2.91□□□□□ -1.94
UPF3BQ9BZI7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.91□□□□□ -1.94
UPF3BQ9BZI7 FCF1P1-201ENST00000432690 571 ntBASIC2.91□□□□□ -1.94
UPF3BQ9BZI7 YWHAZP8-201ENST00000436935 731 ntBASIC2.91□□□□□ -1.94
UPF3BQ9BZI7 AL603825.1-201ENST00000438481 80 ntBASIC2.91□□□□□ -1.94
UPF3BQ9BZI7 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.91□□□□□ -1.94
UPF3BQ9BZI7 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.91□□□□□ -1.94
UPF3BQ9BZI7 MTND5P4-201ENST00000514978 288 ntBASIC2.91□□□□□ -1.94
UPF3BQ9BZI7 RNU6-548P-201ENST00000517083 115 ntBASIC2.91□□□□□ -1.94
UPF3BQ9BZI7 HMGB1P46-201ENST00000520062 610 ntBASIC2.91□□□□□ -1.94
UPF3BQ9BZI7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.91□□□□□ -1.94
UPF3BQ9BZI7 AC092470.1-201ENST00000546187 132 ntBASIC2.91□□□□□ -1.94
UPF3BQ9BZI7 AC079089.3-201ENST00000603094 673 ntBASIC2.91□□□□□ -1.94
UPF3BQ9BZI7 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
UPF3BQ9BZI7 AL360181.4-201ENST00000621752 134 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms