Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 RNA5SP310-201ENST00000459084 116 ntBASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 RN7SL271P-201ENST00000487601 295 ntBASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 AC010342.1-201ENST00000514047 877 ntBASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 AL133153.1-201ENST00000557756 303 ntBASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 ZNF415P1-201ENST00000582279 1166 ntBASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 AF038458.1-201ENST00000588406 262 ntBASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 AC083760.1-201ENST00000589621 670 ntBASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 AP001981.2-201ENST00000603241 418 ntBASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 AL022161.1-201ENST00000604390 213 ntBASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 AP000254.1-201ENST00000609934 520 ntBASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 AC103710.1-201ENST00000610003 901 ntBASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 AC090970.3-201ENST00000612566 866 ntBASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 AC002076.2-201ENST00000617362 122 ntBASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 AC073530.2-201ENST00000623987 261 ntBASIC4.09□□□□□ -1.75
HERPUD2Q9BSE4 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HERPUD2Q9BSE4 FAM35DP-201ENST00000323387 2712 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 SNORA60-201ENST00000362396 134 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 RNA5SP479-201ENST00000364858 117 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 MIR19A-201ENST00000384878 82 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 MT-TH-201ENST00000387441 69 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 AC078974.1-201ENST00000411597 223 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 RPL17P12-201ENST00000413391 526 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 AC007390.1-201ENST00000415722 356 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 AL356095.1-201ENST00000417217 199 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 ZNF833P-201ENST00000424938 1494 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 AL590383.1-201ENST00000428602 75 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 OR4C10P-201ENST00000434991 931 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 RPL17P49-201ENST00000443728 411 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 RANP8-201ENST00000444720 713 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 ELOCP30-201ENST00000447108 299 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 EPS15P1-201ENST00000448836 336 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 AP000797.1-201ENST00000478870 387 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 RNA5SP143-201ENST00000516936 115 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 MTCO1P49-201ENST00000523429 802 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 AC090877.1-201ENST00000561418 344 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 AL020997.2-201ENST00000602607 184 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 AC067959.1-201ENST00000604334 379 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 AC008962.1-201ENST00000605729 304 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 MIR486-1-201ENST00000612171 68 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 AC079684.1-201ENST00000621405 437 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 CR381670.1-201ENST00000624291 1693 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 AL136164.4-201ENST00000625013 2135 ntBASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HERPUD2Q9BSE4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 RNA5SP515-201ENST00000364570 118 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 MIR514A1-201ENST00000385133 98 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 MIR1251-201ENST00000408552 70 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 RNU6-628P-201ENST00000410675 107 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 ATP5HP2-201ENST00000433885 485 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 AL590365.1-201ENST00000450788 243 ntBASIC4.07□□□□□ -1.76
HERPUD2Q9BSE4 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms