Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
VPS25Q9BRG1 MIR4635-201ENST00000583759 79 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AC007229.1-201ENST00000590455 412 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AC022916.3-201ENST00000592961 742 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 CKS1BP3-201ENST00000600888 237 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AC040174.2-201ENST00000602701 465 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AC025588.3-201ENST00000604182 274 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 MTND4P27-201ENST00000450813 1354 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AP006437.1-201ENST00000641440 3685 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
VPS25Q9BRG1 AL161912.2-201ENST00000565707 3007 ntBASIC1.66□□□□□ -2.14
VPS25Q9BRG1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.14
VPS25Q9BRG1 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 RNA5SP72-201ENST00000364442 117 ntBASIC1.65□□□□□ -2.15
VPS25Q9BRG1 SNORA71.1-201ENST00000364523 117 ntBASIC1.65□□□□□ -2.15
VPS25Q9BRG1 SNORA7.4-201ENST00000384249 137 ntBASIC1.65□□□□□ -2.15
VPS25Q9BRG1 MTND4LP20-201ENST00000402379 270 ntBASIC1.65□□□□□ -2.15
VPS25Q9BRG1 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 XKRYP1-201ENST00000423438 492 ntBASIC1.65□□□□□ -2.15
VPS25Q9BRG1 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 GTF2IP20-201ENST00000431663 360 ntBASIC1.65□□□□□ -2.15
VPS25Q9BRG1 XKRYP2-201ENST00000432915 492 ntBASIC1.65□□□□□ -2.15
VPS25Q9BRG1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 Z99127.2-201ENST00000441426 334 ntBASIC1.65□□□□□ -2.15
VPS25Q9BRG1 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 PMCHL2-203ENST00000457791 237 ntBASIC1.65□□□□□ -2.15
VPS25Q9BRG1 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 RPL30P5-201ENST00000494923 336 ntBASIC1.65□□□□□ -2.15
VPS25Q9BRG1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 SCARNA11.3-201ENST00000517276 130 ntBASIC1.65□□□□□ -2.15
VPS25Q9BRG1 AC009812.2-201ENST00000517657 457 ntBASIC1.65□□□□□ -2.15
VPS25Q9BRG1 C1GALT1P3-201ENST00000522049 819 ntBASIC1.65□□□□□ -2.15
VPS25Q9BRG1 CKS1BP7-201ENST00000522230 235 ntBASIC1.65□□□□□ -2.15
VPS25Q9BRG1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 AC078899.2-201ENST00000595282 212 ntBASIC1.65□□□□□ -2.15
VPS25Q9BRG1 YPEL5P2-201ENST00000605553 359 ntBASIC1.65□□□□□ -2.15
VPS25Q9BRG1 AP002826.1-201ENST00000608835 315 ntBASIC1.65□□□□□ -2.15
VPS25Q9BRG1 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 AL034408.1-202ENST00000636088 415 ntBASIC1.65□□□□□ -2.15
VPS25Q9BRG1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC1.65□□□□□ -2.15
VPS25Q9BRG1 AC008568.2-201ENST00000623862 2313 ntBASIC1.65□□□□□ -2.15
VPS25Q9BRG1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 RNU4-23P-201ENST00000362839 140 ntBASIC1.64□□□□□ -2.15
VPS25Q9BRG1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 UBA52P6-201ENST00000399822 382 ntBASIC1.64□□□□□ -2.15
VPS25Q9BRG1 AL445685.2-201ENST00000422551 342 ntBASIC1.64□□□□□ -2.15
VPS25Q9BRG1 MTCO2P17-201ENST00000424336 677 ntBASIC1.64□□□□□ -2.15
VPS25Q9BRG1 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 OR6C71P-201ENST00000432580 913 ntBASIC1.64□□□□□ -2.15
VPS25Q9BRG1 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 AC097499.1-201ENST00000444277 208 ntBASIC1.64□□□□□ -2.15
VPS25Q9BRG1 AL136380.1-201ENST00000447970 162 ntBASIC1.64□□□□□ -2.15
VPS25Q9BRG1 MTND4LP3-201ENST00000468320 276 ntBASIC1.64□□□□□ -2.15
VPS25Q9BRG1 AC117394.1-201ENST00000477323 567 ntBASIC1.64□□□□□ -2.15
VPS25Q9BRG1 AC105252.1-201ENST00000503089 286 ntBASIC1.64□□□□□ -2.15
VPS25Q9BRG1 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 SNORA74D-201ENST00000516404 141 ntBASIC1.64□□□□□ -2.15
VPS25Q9BRG1 SNORA48.10-201ENST00000516965 160 ntBASIC1.64□□□□□ -2.15
VPS25Q9BRG1 RBM7-208ENST00000545678 867 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 AC021749.1-201ENST00000604322 607 ntBASIC1.64□□□□□ -2.15
VPS25Q9BRG1 AC092954.1-201ENST00000609121 445 ntBASIC1.64□□□□□ -2.15
VPS25Q9BRG1 AP000254.1-201ENST00000609934 520 ntBASIC1.64□□□□□ -2.15
VPS25Q9BRG1 MIR6758-201ENST00000620653 63 ntBASIC1.64□□□□□ -2.15
VPS25Q9BRG1 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 AC004520.1-201ENST00000608362 1413 ntBASIC1.64□□□□□ -2.15
VPS25Q9BRG1 AC080128.1-201ENST00000474389 1917 ntBASIC1.64□□□□□ -2.15
VPS25Q9BRG1 AC010329.5-201ENST00000623497 2174 ntBASIC1.64□□□□□ -2.15
VPS25Q9BRG1 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
VPS25Q9BRG1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VPS25Q9BRG1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VPS25Q9BRG1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
VPS25Q9BRG1 ANKRD36P1-201ENST00000344424 659 ntBASIC1.63□□□□□ -2.15
VPS25Q9BRG1 U8.14-201ENST00000390843 143 ntBASIC1.63□□□□□ -2.15
VPS25Q9BRG1 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.63□□□□□ -2.15
VPS25Q9BRG1 RPL7P8-201ENST00000411964 730 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms