Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN18Q99952 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN18Q99952 AL352979.3-201ENST00000553515 247 ntBASIC4.85□□□□□ -1.63
PTPN18Q99952 HSPE1P3-201ENST00000559254 309 ntBASIC4.85□□□□□ -1.63
PTPN18Q99952 LARP7P2-201ENST00000575306 125 ntBASIC4.85□□□□□ -1.63
PTPN18Q99952 AC022655.2-201ENST00000577280 318 ntBASIC4.85□□□□□ -1.63
PTPN18Q99952 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN18Q99952 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN18Q99952 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.85□□□□□ -1.63
PTPN18Q99952 AC012314.7-201ENST00000619693 93 ntBASIC4.85□□□□□ -1.63
PTPN18Q99952 AC091905.2-201ENST00000623143 306 ntBASIC4.85□□□□□ -1.63
PTPN18Q99952 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN18Q99952 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.85□□□□□ -1.63
PTPN18Q99952 AC009093.8-201ENST00000641769 292 ntBASIC4.85□□□□□ -1.63
PTPN18Q99952 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN18Q99952 OR11H5P-202ENST00000641612 1325 ntBASIC4.85□□□□□ -1.63
PTPN18Q99952 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN18Q99952 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.85□□□□□ -1.63
PTPN18Q99952 AC090229.1-201ENST00000590983 1609 ntBASIC4.85□□□□□ -1.63
PTPN18Q99952 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN18Q99952 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN18Q99952 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN18Q99952 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.85□□□□□ -1.63
PTPN18Q99952 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN18Q99952 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTPN18Q99952 AC006971.1-201ENST00000407916 4486 ntBASIC4.85□□□□□ -1.63
PTPN18Q99952 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PTPN18Q99952 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
PTPN18Q99952 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
PTPN18Q99952 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN18Q99952 AL592182.3-201ENST00000642132 3304 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
PTPN18Q99952 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PTPN18Q99952 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.84□□□□□ -1.63
PTPN18Q99952 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN18Q99952 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PTPN18Q99952 RNA5SP307-201ENST00000362863 116 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 RNU6-777P-201ENST00000364265 104 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 RNVU1-3-201ENST00000364313 161 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 Y_RNA.419-201ENST00000384041 102 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 RNA5SP296-201ENST00000410523 111 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 SNORA74C-2-201ENST00000411179 201 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.84□□□□□ -1.63
PTPN18Q99952 AL365400.1-201ENST00000431854 640 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 TBCAP1-201ENST00000436520 327 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 CBWD4P-201ENST00000445695 655 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 ARPC3P5-201ENST00000448802 534 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 AC090602.1-201ENST00000469695 252 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.84□□□□□ -1.63
PTPN18Q99952 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.84□□□□□ -1.63
PTPN18Q99952 AC093767.1-201ENST00000504523 156 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 RNU6-277P-201ENST00000516272 106 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 PTP4A1P6-201ENST00000531034 478 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 AC092470.1-201ENST00000546187 132 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.84□□□□□ -1.63
PTPN18Q99952 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.84□□□□□ -1.63
PTPN18Q99952 AC005255.1-201ENST00000593748 216 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.84□□□□□ -1.63
PTPN18Q99952 BBIP1P1-201ENST00000602999 279 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 AC007566.2-201ENST00000603642 413 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 AC004853.1-201ENST00000604902 698 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 AC113139.1-201ENST00000605049 239 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 AL121655.1-201ENST00000605811 308 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 AC096577.2-201ENST00000611455 153 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.84□□□□□ -1.63
PTPN18Q99952 AL596275.2-204ENST00000641628 552 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 AL596275.2-206ENST00000641957 626 ntBASIC4.84□□□□□ -1.63
PTPN18Q99952 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
PTPN18Q99952 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PTPN18Q99952 SMG1P4-204ENST00000523028 4131 ntBASIC4.84□□□□□ -1.64
PTPN18Q99952 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PTPN18Q99952 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PTPN18Q99952 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
PTPN18Q99952 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN18Q99952 NMD3P1-201ENST00000439704 1488 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN18Q99952 Y_RNA.58-201ENST00000362807 102 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 Y_RNA.154-201ENST00000363624 102 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 RNU6-289P-201ENST00000364093 107 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 RNY3P1-201ENST00000365085 102 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 RNY3-201ENST00000365484 102 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 RNA5SP187-201ENST00000384400 119 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 Y_RNA.490-201ENST00000384413 102 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 RNU6-738P-201ENST00000384531 106 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 ARF4P3-201ENST00000397387 509 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 AL031679.1-201ENST00000400616 525 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 AL592291.1-201ENST00000403830 352 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 RNU2-21P-201ENST00000410368 188 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 VN1R36P-201ENST00000414936 291 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 NCOR1P3-201ENST00000420479 303 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 VTI1BP4-201ENST00000427516 527 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 RSU1P2-202ENST00000437884 485 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 MTND6P18-201ENST00000439477 513 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN18Q99952 AC104073.1-201ENST00000451988 151 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.83□□□□□ -1.64
PTPN18Q99952 RNU7-136P-201ENST00000458819 69 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 AL136126.1-201ENST00000473603 402 ntBASIC4.83□□□□□ -1.64
PTPN18Q99952 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms