Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.14□□□□□ -1.91
SSX3Q99909 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.14□□□□□ -1.91
SSX3Q99909 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.14□□□□□ -1.91
SSX3Q99909 AL592447.1-201ENST00000447592 540 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 AC093392.2-201ENST00000450682 337 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 AC098824.1-201ENST00000453565 980 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 AL109741.2-201ENST00000455561 343 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 AC091179.1-201ENST00000461606 579 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 RPS4XP22-201ENST00000480755 780 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 AC068724.1-201ENST00000487100 792 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 HMGB1P36-201ENST00000487709 576 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.14□□□□□ -1.91
SSX3Q99909 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.14□□□□□ -1.91
SSX3Q99909 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.14□□□□□ -1.91
SSX3Q99909 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.14□□□□□ -1.91
SSX3Q99909 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.14□□□□□ -1.91
SSX3Q99909 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.14□□□□□ -1.91
SSX3Q99909 AC112673.1-201ENST00000513168 575 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.14□□□□□ -1.91
SSX3Q99909 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.14□□□□□ -1.91
SSX3Q99909 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.14□□□□□ -1.91
SSX3Q99909 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.14□□□□□ -1.91
SSX3Q99909 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.14□□□□□ -1.91
SSX3Q99909 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SSX3Q99909 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.14□□□□□ -1.91
SSX3Q99909 VN1R92P-201ENST00000598511 928 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.14□□□□□ -1.91
SSX3Q99909 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 AC002550.2-201ENST00000621246 394 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 AC009039.2-201ENST00000624524 529 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.14□□□□□ -1.91
SSX3Q99909 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.14□□□□□ -1.91
SSX3Q99909 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.14□□□□□ -1.91
SSX3Q99909 AP004289.2-201ENST00000444413 1457 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SSX3Q99909 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.14□□□□□ -1.91
SSX3Q99909 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SSX3Q99909 MTCO1P9-201ENST00000505577 1534 ntBASIC3.14□□□□□ -1.91
SSX3Q99909 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.13□□□□□ -1.91
SSX3Q99909 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SSX3Q99909 FRG1BP-201ENST00000278882 761 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 AP000568.1-201ENST00000282964 442 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 AL359837.1-201ENST00000381357 287 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 RNU6-253P-201ENST00000384730 105 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.13□□□□□ -1.91
SSX3Q99909 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.13□□□□□ -1.91
SSX3Q99909 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SSX3Q99909 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.13□□□□□ -1.91
SSX3Q99909 DPPA2P1-201ENST00000428060 556 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.13□□□□□ -1.91
SSX3Q99909 AL353705.1-201ENST00000433468 480 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 AC092573.2-201ENST00000434546 243 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.13□□□□□ -1.91
SSX3Q99909 NDUFB4P6-201ENST00000436819 366 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 YWHAZP7-201ENST00000436906 631 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.13□□□□□ -1.91
SSX3Q99909 MTCO1P27-201ENST00000448269 226 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 AC010655.1-201ENST00000449336 292 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.13□□□□□ -1.91
SSX3Q99909 RPL30P9-201ENST00000465586 330 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 AC034236.1-201ENST00000469891 373 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 AC006483.1-201ENST00000487308 313 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 RPL21P129-201ENST00000491732 478 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
SSX3Q99909 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.13□□□□□ -1.91
SSX3Q99909 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.13□□□□□ -1.91
SSX3Q99909 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SSX3Q99909 RN7SKP209-201ENST00000516888 304 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 RNU6-528P-201ENST00000516926 100 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 OR5AP1P-201ENST00000529730 940 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.13□□□□□ -1.91
SSX3Q99909 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.13□□□□□ -1.91
SSX3Q99909 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.13□□□□□ -1.91
SSX3Q99909 MIR4999-201ENST00000585029 91 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 AL031985.2-201ENST00000600955 480 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.13□□□□□ -1.91
SSX3Q99909 HSPE1P7-201ENST00000604681 321 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 AC026790.2-201ENST00000606282 430 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 AC107294.3-201ENST00000609211 526 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 AC087683.2-201ENST00000611384 326 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.13□□□□□ -1.91
SSX3Q99909 AC005344.1-201ENST00000613391 459 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 AL356596.1-201ENST00000624230 379 ntBASIC3.13□□□□□ -1.91
SSX3Q99909 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.13□□□□□ -1.91
SSX3Q99909 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SSX3Q99909 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SSX3Q99909 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SSX3Q99909 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SSX3Q99909 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.12□□□□□ -1.91
SSX3Q99909 RPL21P132-201ENST00000331267 462 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 RNU6-359P-201ENST00000365466 108 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SSX3Q99909 RNU6-723P-201ENST00000383973 107 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 RNU6-1200P-201ENST00000384162 107 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SSX3Q99909 PTMAP2-201ENST00000397627 327 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SSX3Q99909 BX119904.4-201ENST00000424402 301 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.12□□□□□ -1.91
SSX3Q99909 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms