Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MTND4LP10-201ENST00000435146 291 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
COL21A1Q96P44 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.71□□□□□ -1.98
COL21A1Q96P44 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.71□□□□□ -1.98
COL21A1Q96P44 RN7SL429P-201ENST00000479090 223 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 RPL9P33-201ENST00000484311 566 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 RN7SL489P-201ENST00000486185 223 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.71□□□□□ -1.98
COL21A1Q96P44 RN7SL327P-201ENST00000488659 223 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 AC083906.5-201ENST00000503722 328 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 KLHL2P1-201ENST00000508691 521 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 snoZ278.1-201ENST00000517059 112 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.71□□□□□ -1.98
COL21A1Q96P44 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.71□□□□□ -1.98
COL21A1Q96P44 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.71□□□□□ -1.98
COL21A1Q96P44 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.71□□□□□ -1.98
COL21A1Q96P44 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.71□□□□□ -1.98
COL21A1Q96P44 ZNF971P-201ENST00000562068 1249 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.71□□□□□ -1.98
COL21A1Q96P44 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.71□□□□□ -1.98
COL21A1Q96P44 AP000238.1-201ENST00000608759 426 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 RN7SL853P-201ENST00000617250 223 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
COL21A1Q96P44 AC010338.1-201ENST00000621823 717 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 AC095031.1-201ENST00000623685 672 ntBASIC2.71□□□□□ -1.98
COL21A1Q96P44 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.71□□□□□ -1.98
COL21A1Q96P44 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
COL21A1Q96P44 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.7□□□□□ -1.98
COL21A1Q96P44 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
COL21A1Q96P44 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
COL21A1Q96P44 MIR181A2-201ENST00000384863 110 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 MIR506-201ENST00000384998 124 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 MTND4P13-201ENST00000402078 1023 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 RPL7P27-201ENST00000403775 720 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 MIR1289-1-201ENST00000408836 144 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.7□□□□□ -1.98
COL21A1Q96P44 USP9YP19-201ENST00000412165 485 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 AC092634.6-201ENST00000418558 192 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 MTCO3P1-205ENST00000422088 832 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.7□□□□□ -1.98
COL21A1Q96P44 MTCYBP32-201ENST00000427945 1084 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.7□□□□□ -1.98
COL21A1Q96P44 RPL17P49-201ENST00000443728 411 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 NANOGNBP1-201ENST00000448444 480 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 RPL23AP31-201ENST00000456160 467 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.7□□□□□ -1.98
COL21A1Q96P44 DYNLL1P6-201ENST00000503440 264 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.7□□□□□ -1.98
COL21A1Q96P44 SCGB1D5P-201ENST00000515134 247 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 RNU6-467P-201ENST00000517027 110 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 AC023632.1-201ENST00000518463 375 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.7□□□□□ -1.98
COL21A1Q96P44 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.7□□□□□ -1.98
COL21A1Q96P44 OR4R2P-201ENST00000530815 597 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 SNRPGP16-201ENST00000533275 226 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 AC068339.2-201ENST00000534395 618 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 AC087894.1-201ENST00000538359 518 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 AC126177.3-201ENST00000551839 688 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.7□□□□□ -1.98
COL21A1Q96P44 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.7□□□□□ -1.98
COL21A1Q96P44 BDH2P1-201ENST00000602288 736 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 AL035411.2-201ENST00000604022 421 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 AC009220.3-201ENST00000604318 586 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 AP005137.2-201ENST00000609238 400 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 AL359198.2-201ENST00000611836 194 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 AC135507.2-201ENST00000612443 309 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 AC231759.1-201ENST00000616455 597 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 AC068831.7-201ENST00000616954 363 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 AC002076.2-201ENST00000617362 122 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.7□□□□□ -1.98
COL21A1Q96P44 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.7□□□□□ -1.98
COL21A1Q96P44 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
COL21A1Q96P44 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
COL21A1Q96P44 AC092435.3-201ENST00000565538 3654 ntBASIC2.69□□□□□ -1.98
COL21A1Q96P44 MTCO1P23-201ENST00000415223 1526 ntBASIC2.69□□□□□ -1.98
COL21A1Q96P44 AC009487.2-201ENST00000420969 6821 ntBASIC2.69□□□□□ -1.98
COL21A1Q96P44 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.69□□□□□ -1.98
COL21A1Q96P44 GABRG2-229ENST00000641017 3628 ntBASIC2.69□□□□□ -1.98
COL21A1Q96P44 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
COL21A1Q96P44 RNU6-492P-201ENST00000363035 104 ntBASIC2.69□□□□□ -1.98
COL21A1Q96P44 Y_RNA.510-201ENST00000384511 114 ntBASIC2.69□□□□□ -1.98
COL21A1Q96P44 RNU6-878P-201ENST00000384578 110 ntBASIC2.69□□□□□ -1.98
COL21A1Q96P44 RNU6-1077P-201ENST00000410506 102 ntBASIC2.69□□□□□ -1.98
COL21A1Q96P44 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.69□□□□□ -1.98
COL21A1Q96P44 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
COL21A1Q96P44 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.69□□□□□ -1.98
COL21A1Q96P44 YPEL5P1-201ENST00000419731 367 ntBASIC2.69□□□□□ -1.98
COL21A1Q96P44 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.69□□□□□ -1.98
COL21A1Q96P44 ARF4P4-201ENST00000439608 520 ntBASIC2.69□□□□□ -1.98
COL21A1Q96P44 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.69□□□□□ -1.98
COL21A1Q96P44 AL121871.1-201ENST00000443413 436 ntBASIC2.69□□□□□ -1.98
COL21A1Q96P44 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.69□□□□□ -1.98
COL21A1Q96P44 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.69□□□□□ -1.98
COL21A1Q96P44 HMGN2P13-201ENST00000476476 274 ntBASIC2.69□□□□□ -1.98
COL21A1Q96P44 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.69□□□□□ -1.98
COL21A1Q96P44 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.69□□□□□ -1.98
COL21A1Q96P44 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.69□□□□□ -1.98
COL21A1Q96P44 RNU6-27P-201ENST00000516146 107 ntBASIC2.69□□□□□ -1.98
COL21A1Q96P44 RNU6-1095P-201ENST00000516148 108 ntBASIC2.69□□□□□ -1.98
COL21A1Q96P44 SNORD59.2-201ENST00000516873 68 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms