Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AL354692.1-201ENST00000423044 315 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 DPPA2P1-201ENST00000428060 556 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.37□□□□□ -1.87
ZNF560Q96MR9 AC004866.2-201ENST00000438285 481 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 AL031313.1-201ENST00000448435 256 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 AL353691.1-201ENST00000451332 387 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 RPL27AP5-201ENST00000469428 449 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 RPS23P3-201ENST00000470993 430 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 RN7SL442P-201ENST00000473804 320 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 AC006483.1-201ENST00000487308 313 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.37□□□□□ -1.87
ZNF560Q96MR9 AC022861.1-201ENST00000522981 663 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.37□□□□□ -1.87
ZNF560Q96MR9 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.37□□□□□ -1.87
ZNF560Q96MR9 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF560Q96MR9 MIR3200-201ENST00000580767 85 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 UBL5P2-201ENST00000583788 219 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 AL109653.1-201ENST00000603091 248 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 PRELID3BP8-201ENST00000604148 295 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 AL031176.1-201ENST00000604554 466 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 AL139022.2-201ENST00000606934 443 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 AL591516.1-201ENST00000611326 274 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.37□□□□□ -1.87
ZNF560Q96MR9 AC099654.9-201ENST00000637055 678 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 MIR622-201ENST00000638396 96 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
ZNF560Q96MR9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF560Q96MR9 AC110774.1-201ENST00000623567 2018 ntBASIC3.37□□□□□ -1.87
ZNF560Q96MR9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
ZNF560Q96MR9 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.37□□□□□ -1.87
ZNF560Q96MR9 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.36□□□□□ -1.87
ZNF560Q96MR9 AL356473.1-201ENST00000406203 1408 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 AL079343.1-201ENST00000572358 1771 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 NACA3P-201ENST00000359690 648 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 SNORD15B-201ENST00000384714 146 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 RNA5SP107-201ENST00000411358 122 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.36□□□□□ -1.87
ZNF560Q96MR9 RPS7P13-201ENST00000413955 498 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 RPS3AP37-201ENST00000419176 745 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 BEND7P1-201ENST00000422058 457 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.36□□□□□ -1.87
ZNF560Q96MR9 UBE2D3P2-201ENST00000424409 445 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.36□□□□□ -1.87
ZNF560Q96MR9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.36□□□□□ -1.87
ZNF560Q96MR9 SDR42E1P3-201ENST00000438345 502 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 AC108734.1-201ENST00000439549 399 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 CYCSP32-201ENST00000440548 321 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 RPL23AP76-201ENST00000441860 458 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.36□□□□□ -1.87
ZNF560Q96MR9 AC104164.3-201ENST00000467363 1258 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 RPL7P5-201ENST00000471472 736 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.36□□□□□ -1.87
ZNF560Q96MR9 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.36□□□□□ -1.87
ZNF560Q96MR9 AC119751.4-201ENST00000507498 357 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 OR10V3P-201ENST00000525712 725 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ZNF560Q96MR9 MTCYBP23-201ENST00000558717 1102 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 MED28P6-201ENST00000558776 231 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 AADACP1-206ENST00000561502 1193 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.36□□□□□ -1.87
ZNF560Q96MR9 VN1R78P-201ENST00000597393 564 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 AC006539.2-201ENST00000601729 572 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 AC091057.3-201ENST00000602684 733 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 AL022099.1-201ENST00000604551 712 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 AC106028.5-201ENST00000610332 395 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 AC100793.4-201ENST00000613683 429 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.36□□□□□ -1.87
ZNF560Q96MR9 AC091953.5-201ENST00000622919 233 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 AP001002.2-201ENST00000625137 386 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ZNF560Q96MR9 AF117829.1-206ENST00000621883 3802 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 ZNF807-201ENST00000328088 1707 ntBASIC3.36□□□□□ -1.87
ZNF560Q96MR9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.36□□□□□ -1.87
ZNF560Q96MR9 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.35□□□□□ -1.87
ZNF560Q96MR9 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ZNF560Q96MR9 RPL7P26-201ENST00000333817 754 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.35□□□□□ -1.87
ZNF560Q96MR9 DHFRP6-201ENST00000401776 268 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 ERHP2-201ENST00000402323 299 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 RPL7P25-201ENST00000404151 721 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 RNA5SP293-201ENST00000410527 113 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.35□□□□□ -1.87
ZNF560Q96MR9 RPL32P35-201ENST00000415214 394 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 TIMM9P2-201ENST00000419324 266 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 MTCO2P5-201ENST00000422621 426 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.35□□□□□ -1.87
ZNF560Q96MR9 USP9YP11-201ENST00000427537 717 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.35□□□□□ -1.87
ZNF560Q96MR9 RPL23AP69-201ENST00000431134 458 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AL645638.1-201ENST00000440519 361 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AL671855.1-201ENST00000446875 1203 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AC016696.1-201ENST00000446949 318 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 EXOSC3P1-201ENST00000448649 500 ntBASIC3.35□□□□□ -1.87
ZNF560Q96MR9 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms