Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.26□□□□□ -1.89
USP47Q96K76 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.26□□□□□ -1.89
USP47Q96K76 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.26□□□□□ -1.89
USP47Q96K76 XIST_intron.1-201ENST00000619444 68 ntBASIC3.26□□□□□ -1.89
USP47Q96K76 MAPK10-322ENST00000641485 4530 ntBASIC3.26□□□□□ -1.89
USP47Q96K76 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
USP47Q96K76 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
USP47Q96K76 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
USP47Q96K76 TOMM22P1-201ENST00000418578 312 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 AC008173.1-201ENST00000418901 264 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.25□□□□□ -1.89
USP47Q96K76 DPH3P2-201ENST00000422618 250 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.25□□□□□ -1.89
USP47Q96K76 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.25□□□□□ -1.89
USP47Q96K76 YWHAZP7-201ENST00000436906 631 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.25□□□□□ -1.89
USP47Q96K76 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.25□□□□□ -1.89
USP47Q96K76 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
USP47Q96K76 MTND2P30-201ENST00000456663 382 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 RPL23AP55-201ENST00000498163 452 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.25□□□□□ -1.89
USP47Q96K76 XKRY-201ENST00000510392 1100 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 HIGD1AP6-201ENST00000521833 279 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.25□□□□□ -1.89
USP47Q96K76 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.25□□□□□ -1.89
USP47Q96K76 AC015712.3-201ENST00000559380 164 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.25□□□□□ -1.89
USP47Q96K76 AC107954.1-201ENST00000565906 727 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.25□□□□□ -1.89
USP47Q96K76 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.25□□□□□ -1.89
USP47Q96K76 VN1R88P-201ENST00000596787 292 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.25□□□□□ -1.89
USP47Q96K76 AC011468.4-201ENST00000603942 409 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 AC025754.2-201ENST00000606491 432 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
USP47Q96K76 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
USP47Q96K76 VN1R7P-201ENST00000619242 903 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 AC068620.4-201ENST00000636730 1182 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 AC241585.2-209ENST00000638217 143 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
USP47Q96K76 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
USP47Q96K76 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
USP47Q96K76 AC008432.1-201ENST00000615912 1320 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.25□□□□□ -1.89
USP47Q96K76 AP006437.1-201ENST00000641440 3685 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 RNU1-51P-201ENST00000365345 176 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 RNU6-1226P-201ENST00000384317 107 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 MIR607-201ENST00000385241 96 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 RNU4-26P-201ENST00000410270 107 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 RNU4-27P-201ENST00000410889 139 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 RPL31P2-201ENST00000413849 377 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.25□□□□□ -1.89
USP47Q96K76 MTCO1P43-201ENST00000431831 488 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.25□□□□□ -1.89
USP47Q96K76 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.25□□□□□ -1.89
USP47Q96K76 BTBD7P2-201ENST00000441962 620 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.25□□□□□ -1.89
USP47Q96K76 RPS15AP1-201ENST00000457423 391 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 AC089999.1-201ENST00000460336 374 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.25□□□□□ -1.89
USP47Q96K76 RNF138P1-201ENST00000502765 546 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.25□□□□□ -1.89
USP47Q96K76 RNA5SP281-201ENST00000516504 135 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 RNU6-826P-201ENST00000516827 104 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 MTCYBP41-201ENST00000528913 1123 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.25□□□□□ -1.89
USP47Q96K76 ZNF192P1-203ENST00000565888 810 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 MIR1273D-201ENST00000577266 86 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.25□□□□□ -1.89
USP47Q96K76 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.25□□□□□ -1.89
USP47Q96K76 AC006213.5-201ENST00000619673 288 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 MIR6766-201ENST00000622641 72 ntBASIC3.25□□□□□ -1.89
USP47Q96K76 AC097714.1-201ENST00000511272 1647 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
USP47Q96K76 MTND5P6-201ENST00000422338 1798 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
USP47Q96K76 ZNF37BP-203ENST00000452306 1352 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
USP47Q96K76 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
USP47Q96K76 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.24□□□□□ -1.89
USP47Q96K76 AC092447.7-201ENST00000422212 1621 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 AC091152.2-201ENST00000591628 2569 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 RNU6-792P-201ENST00000363490 107 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 SNORA7.2-201ENST00000364446 145 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 RNU6-335P-201ENST00000364563 113 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 RNU1-73P-201ENST00000383971 164 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 RNU6-629P-201ENST00000384061 103 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 RPS3AP26-201ENST00000398259 784 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 RNU6-77P-201ENST00000410554 91 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 AC007064.1-201ENST00000412238 351 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 UBE2V1P9-201ENST00000414760 368 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 FAM204CP-201ENST00000424489 642 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.24□□□□□ -1.89
USP47Q96K76 MTCYBP31-201ENST00000438855 1122 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.24□□□□□ -1.89
USP47Q96K76 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.24□□□□□ -1.89
USP47Q96K76 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.24□□□□□ -1.89
USP47Q96K76 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.24□□□□□ -1.89
USP47Q96K76 SYPL1P1-201ENST00000473622 768 ntBASIC3.24□□□□□ -1.89
USP47Q96K76 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms