Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 USP9YP32-201ENST00000452432 430 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 RN7SL352P-201ENST00000466002 277 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 AC021074.2-201ENST00000468434 172 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 SNRPCP2-201ENST00000504370 475 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 SERF1AP1-201ENST00000514575 187 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 IGKV2-38-201ENST00000517443 247 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 TRAPPC2P2-201ENST00000517589 409 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 IGHV1-14-201ENST00000523391 241 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 AC010186.2-204ENST00000537668 439 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 AC073916.1-201ENST00000545095 130 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 AC027667.1-201ENST00000545814 304 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 AC126177.5-201ENST00000549599 178 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.04□□□□□ -1.44
HLA-CQ95604 AC005951.2-201ENST00000576282 495 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC6.04□□□□□ -1.44
HLA-CQ95604 FAM25E-202ENST00000608562 189 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 MIR8076-201ENST00000611401 83 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
HLA-CQ95604 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-CQ95604 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-CQ95604 MAPK10-365ENST00000641902 3825 ntBASIC6.04□□□□□ -1.44
HLA-CQ95604 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-CQ95604 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HLA-CQ95604 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HLA-CQ95604 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.03□□□□□ -1.44
HLA-CQ95604 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-CQ95604 ZNF285B-201ENST00000561698 1767 ntBASIC6.03□□□□□ -1.44
HLA-CQ95604 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-CQ95604 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-CQ95604 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-CQ95604 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-CQ95604 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-CQ95604 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-CQ95604 RPL9P7-201ENST00000330965 580 ntBASIC6.03□□□□□ -1.44
HLA-CQ95604 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-CQ95604 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-CQ95604 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HLA-CQ95604 AL096701.2-201ENST00000416920 238 ntBASIC6.03□□□□□ -1.44
HLA-CQ95604 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.03□□□□□ -1.44
HLA-CQ95604 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-CQ95604 AC091286.1-201ENST00000431233 461 ntBASIC6.03□□□□□ -1.44
HLA-CQ95604 AL513043.1-201ENST00000439124 535 ntBASIC6.03□□□□□ -1.44
HLA-CQ95604 PIGFP3-201ENST00000441918 722 ntBASIC6.03□□□□□ -1.44
HLA-CQ95604 ISCUP1-201ENST00000454451 448 ntBASIC6.03□□□□□ -1.44
HLA-CQ95604 RN7SKP210-201ENST00000459176 261 ntBASIC6.03□□□□□ -1.44
HLA-CQ95604 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.03□□□□□ -1.44
HLA-CQ95604 RPL9P9-202ENST00000466501 579 ntBASIC6.03□□□□□ -1.44
HLA-CQ95604 RN7SL738P-201ENST00000470264 297 ntBASIC6.03□□□□□ -1.44
HLA-CQ95604 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-CQ95604 RN7SL346P-201ENST00000491561 294 ntBASIC6.03□□□□□ -1.44
HLA-CQ95604 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.03□□□□□ -1.44
HLA-CQ95604 RNU6-1095P-201ENST00000516148 108 ntBASIC6.03□□□□□ -1.44
HLA-CQ95604 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.03□□□□□ -1.44
HLA-CQ95604 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-CQ95604 MIR3189-201ENST00000578735 73 ntBASIC6.03□□□□□ -1.44
HLA-CQ95604 MIR3934-201ENST00000579806 107 ntBASIC6.03□□□□□ -1.44
HLA-CQ95604 PRPF19P1-201ENST00000584766 898 ntBASIC6.03□□□□□ -1.44
HLA-CQ95604 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-CQ95604 AC091953.3-201ENST00000623220 236 ntBASIC6.03□□□□□ -1.44
HLA-CQ95604 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-CQ95604 MIR4496-201ENST00000635896 61 ntBASIC6.03□□□□□ -1.44
HLA-CQ95604 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HLA-CQ95604 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HLA-CQ95604 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-CQ95604 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-CQ95604 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
HLA-CQ95604 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
HLA-CQ95604 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-CQ95604 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
HLA-CQ95604 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.03□□□□□ -1.44
HLA-CQ95604 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-CQ95604 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
HLA-CQ95604 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.02□□□□□ -1.44
HLA-CQ95604 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-CQ95604 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.02□□□□□ -1.45
HLA-CQ95604 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.02□□□□□ -1.45
HLA-CQ95604 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-CQ95604 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-CQ95604 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-CQ95604 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HLA-CQ95604 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-CQ95604 AC009643.2-201ENST00000603543 1448 ntBASIC6.02□□□□□ -1.45
HLA-CQ95604 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-CQ95604 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-CQ95604 RNU6-704P-201ENST00000364162 103 ntBASIC6.02□□□□□ -1.45
HLA-CQ95604 RNY3P4-201ENST00000384428 101 ntBASIC6.02□□□□□ -1.45
HLA-CQ95604 AL133388.1-201ENST00000404509 287 ntBASIC6.02□□□□□ -1.45
HLA-CQ95604 AC063979.1-201ENST00000415539 377 ntBASIC6.02□□□□□ -1.45
HLA-CQ95604 EIF1P2-201ENST00000428233 350 ntBASIC6.02□□□□□ -1.45
HLA-CQ95604 MRPS21P3-201ENST00000436696 262 ntBASIC6.02□□□□□ -1.45
HLA-CQ95604 RPL10P17-201ENST00000453852 316 ntBASIC6.02□□□□□ -1.45
HLA-CQ95604 HMGN1P11-201ENST00000508668 303 ntBASIC6.02□□□□□ -1.45
HLA-CQ95604 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC6.02□□□□□ -1.45
HLA-CQ95604 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.02□□□□□ -1.45
HLA-CQ95604 SYF2P1-201ENST00000550658 413 ntBASIC6.02□□□□□ -1.45
HLA-CQ95604 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC6.02□□□□□ -1.45
HLA-CQ95604 RNF138P2-201ENST00000603490 592 ntBASIC6.02□□□□□ -1.45
HLA-CQ95604 Y_RNA.772-201ENST00000606692 102 ntBASIC6.02□□□□□ -1.45
HLA-CQ95604 uc_338.26-201ENST00000612659 160 ntBASIC6.02□□□□□ -1.45
HLA-CQ95604 AC004852.3-201ENST00000614131 326 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms