Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 AL513321.1-201ENST00000441175 761 ntBASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 AL031659.1-201ENST00000447075 539 ntBASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 RNF138P1-201ENST00000502765 546 ntBASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 SNORA31.13-201ENST00000516624 135 ntBASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 OR4R2P-201ENST00000530815 597 ntBASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 AL391156.1-201ENST00000554965 554 ntBASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 GLUD1P4-201ENST00000590914 418 ntBASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 AC011374.2-201ENST00000607135 526 ntBASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 AC067747.1-201ENST00000608026 250 ntBASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 AL355810.1-201ENST00000614629 552 ntBASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 AC009032.1-201ENST00000617574 431 ntBASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 AL360181.4-201ENST00000621752 134 ntBASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 SGO1P2-201ENST00000429458 1589 ntBASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
CCDC112Q8NEF3 RNU4-82P-201ENST00000362443 140 ntBASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 SNORD114-30-201ENST00000364448 72 ntBASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 RNU6-339P-201ENST00000384310 107 ntBASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 RPS15AP7-201ENST00000439294 405 ntBASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 AC097499.1-201ENST00000444277 208 ntBASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 RPS26P56-201ENST00000444468 240 ntBASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 RPL30P14-201ENST00000482744 348 ntBASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 AC093663.2-201ENST00000484625 313 ntBASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 MTCO1P31-201ENST00000506355 492 ntBASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 AC009097.3-201ENST00000563557 1018 ntBASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 ACTR3BP3-201ENST00000565577 979 ntBASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 MYL12BP1-201ENST00000569826 507 ntBASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 AP001330.4-201ENST00000604350 154 ntBASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 AC140725.3-201ENST00000616193 880 ntBASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 MIR6076-201ENST00000617521 113 ntBASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 AC097372.4-201ENST00000625025 466 ntBASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
CCDC112Q8NEF3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 RNU6-1249P-201ENST00000363237 111 ntBASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 MIR34A-201ENST00000385130 110 ntBASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 RPS4XP3-201ENST00000398541 413 ntBASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 AL035407.1-201ENST00000429211 571 ntBASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 LSM1P1-201ENST00000438629 273 ntBASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 AL590664.1-201ENST00000448065 339 ntBASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 AC108157.1-201ENST00000510511 539 ntBASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 AC092470.1-201ENST00000546187 132 ntBASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 CKS1BP1-201ENST00000555221 240 ntBASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 CBX3P2-202ENST00000583365 535 ntBASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 AC061975.8-201ENST00000587058 721 ntBASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 AC128687.1-201ENST00000605304 619 ntBASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 U6.107-201ENST00000637108 79 ntBASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 AC046144.1-201ENST00000478559 1853 ntBASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC112Q8NEF3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 CKAP2P1-201ENST00000555477 2049 ntBASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 AL049780.3-201ENST00000624612 1583 ntBASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 RNU2-52P-201ENST00000410680 190 ntBASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 ATP5F1P1-201ENST00000433775 569 ntBASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 AP000936.2-201ENST00000447151 681 ntBASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 AC126389.1-201ENST00000477436 290 ntBASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 AC096751.1-202ENST00000502691 1067 ntBASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 TTC39CP1-201ENST00000512513 755 ntBASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 SNORA31.8-201ENST00000516327 108 ntBASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 C1DP5-201ENST00000525775 383 ntBASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 OR4R1P-201ENST00000529879 463 ntBASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 NOP56P3-201ENST00000549457 385 ntBASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 AC009163.5-201ENST00000575421 637 ntBASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC112Q8NEF3 AC010620.2-201ENST00000600135 313 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms