Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AC100793.4-201ENST00000613683 429 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AC116165.2-201ENST00000616705 206 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AL603839.4-201ENST00000624658 1005 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AC092104.1-201ENST00000497346 1441 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 U1.1-201ENST00000384101 164 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 U8.11-201ENST00000384699 133 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 U8.12-201ENST00000384701 133 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 Y_RNA.608-201ENST00000410647 95 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AL663109.1-201ENST00000411498 844 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 RAB9AP3-201ENST00000412737 573 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AC007899.1-201ENST00000412776 775 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AC083863.1-201ENST00000438811 231 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 HMGB1P37-201ENST00000439613 609 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 TEX21P-201ENST00000447107 1476 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 RAB9AP1-201ENST00000449393 573 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AL033528.1-201ENST00000453780 140 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 U8.18-201ENST00000459285 133 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 SNORD42A-201ENST00000459584 64 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 MTCO2P32-201ENST00000514865 403 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AP002453.2-201ENST00000533503 320 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AC009101.1-201ENST00000568135 242 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AC012213.3-201ENST00000577199 777 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AC103591.3-201ENST00000608684 209 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AP000254.1-201ENST00000609934 520 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AC122108.2-201ENST00000611946 526 ntBASIC3.57□□□□□ -1.84
BEST3Q8N1M1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.57□□□□□ -1.84
BEST3Q8N1M1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 AC011460.1-201ENST00000636268 1834 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 MTND5P33-201ENST00000571250 1450 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 Y_RNA.46-201ENST00000362695 102 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 OR5H15-201ENST00000383696 930 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 SNORA75-201ENST00000384158 137 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 SNORA40.3-201ENST00000390964 122 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 RPS20P2-201ENST00000402520 389 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 RPS7P15-201ENST00000415804 584 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 USP9YP13-201ENST00000417797 480 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 MTND1P27-201ENST00000451117 902 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 NANOGP10-201ENST00000453325 895 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 snoU109.1-201ENST00000459339 135 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 AC034236.1-201ENST00000469891 373 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 AC017037.2-201ENST00000513850 890 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 RNU6-1095P-201ENST00000516148 108 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 SCARNA14-201ENST00000516903 136 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 RNU6-201P-201ENST00000517100 61 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 AC022695.1-201ENST00000522089 237 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.56□□□□□ -1.84
BEST3Q8N1M1 AL121603.1-201ENST00000553815 142 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 GNRHR2P1-201ENST00000555315 631 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 MIR4444-1-201ENST00000581696 74 ntBASIC3.56□□□□□ -1.84
BEST3Q8N1M1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms