Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC011933.1-201ENST00000413334 321 ntBASIC5.9□□□□□ -1.46
RNF135Q8IUD6 AC093162.1-201ENST00000419682 124 ntBASIC5.9□□□□□ -1.46
RNF135Q8IUD6 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF135Q8IUD6 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF135Q8IUD6 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.9□□□□□ -1.46
RNF135Q8IUD6 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF135Q8IUD6 DYNLT3P2-201ENST00000442517 295 ntBASIC5.9□□□□□ -1.46
RNF135Q8IUD6 AC112492.4-201ENST00000456549 352 ntBASIC5.9□□□□□ -1.46
RNF135Q8IUD6 AC245028.2-201ENST00000458673 253 ntBASIC5.9□□□□□ -1.46
RNF135Q8IUD6 RPL37P6-202ENST00000464216 403 ntBASIC5.9□□□□□ -1.46
RNF135Q8IUD6 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF135Q8IUD6 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF135Q8IUD6 RNU6-352P-201ENST00000516908 107 ntBASIC5.9□□□□□ -1.46
RNF135Q8IUD6 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.9□□□□□ -1.46
RNF135Q8IUD6 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF135Q8IUD6 AC067852.3-201ENST00000589177 561 ntBASIC5.9□□□□□ -1.46
RNF135Q8IUD6 AC078899.3-201ENST00000599065 212 ntBASIC5.9□□□□□ -1.46
RNF135Q8IUD6 SNORD58B-201ENST00000607313 66 ntBASIC5.9□□□□□ -1.46
RNF135Q8IUD6 AP000346.3-201ENST00000622821 210 ntBASIC5.9□□□□□ -1.46
RNF135Q8IUD6 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.9□□□□□ -1.47
RNF135Q8IUD6 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
RNF135Q8IUD6 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
RNF135Q8IUD6 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RNF135Q8IUD6 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
RNF135Q8IUD6 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
RNF135Q8IUD6 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
RNF135Q8IUD6 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.9□□□□□ -1.47
RNF135Q8IUD6 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RNF135Q8IUD6 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RNF135Q8IUD6 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RNF135Q8IUD6 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
RNF135Q8IUD6 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RNF135Q8IUD6 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RNF135Q8IUD6 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 MTND5P7-201ENST00000413558 1798 ntBASIC5.89□□□□□ -1.47
RNF135Q8IUD6 U3.2-201ENST00000362981 210 ntBASIC5.89□□□□□ -1.47
RNF135Q8IUD6 Y_RNA.152-201ENST00000363578 100 ntBASIC5.89□□□□□ -1.47
RNF135Q8IUD6 Y_RNA.424-201ENST00000384063 103 ntBASIC5.89□□□□□ -1.47
RNF135Q8IUD6 Y_RNA.555-201ENST00000384673 110 ntBASIC5.89□□□□□ -1.47
RNF135Q8IUD6 RNU6-713P-201ENST00000384761 107 ntBASIC5.89□□□□□ -1.47
RNF135Q8IUD6 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 AC139712.2-201ENST00000424302 339 ntBASIC5.89□□□□□ -1.47
RNF135Q8IUD6 AL645568.3-201ENST00000433683 316 ntBASIC5.89□□□□□ -1.47
RNF135Q8IUD6 ELOCP18-201ENST00000434209 337 ntBASIC5.89□□□□□ -1.47
RNF135Q8IUD6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 OSTCP8-201ENST00000445117 448 ntBASIC5.89□□□□□ -1.47
RNF135Q8IUD6 AC008264.1-201ENST00000447612 367 ntBASIC5.89□□□□□ -1.47
RNF135Q8IUD6 RPS29P33-201ENST00000456717 146 ntBASIC5.89□□□□□ -1.47
RNF135Q8IUD6 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 RN7SL738P-201ENST00000470264 297 ntBASIC5.89□□□□□ -1.47
RNF135Q8IUD6 BX284632.1-201ENST00000478218 541 ntBASIC5.89□□□□□ -1.47
RNF135Q8IUD6 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 RN7SKP60-201ENST00000516985 239 ntBASIC5.89□□□□□ -1.47
RNF135Q8IUD6 AP003385.6-201ENST00000531603 374 ntBASIC5.89□□□□□ -1.47
RNF135Q8IUD6 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 MIR3934-201ENST00000579806 107 ntBASIC5.89□□□□□ -1.47
RNF135Q8IUD6 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 AP001005.3-201ENST00000622049 129 ntBASIC5.89□□□□□ -1.47
RNF135Q8IUD6 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF135Q8IUD6 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.88□□□□□ -1.47
RNF135Q8IUD6 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF135Q8IUD6 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF135Q8IUD6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF135Q8IUD6 AC010615.1-201ENST00000594254 1764 ntBASIC5.88□□□□□ -1.47
RNF135Q8IUD6 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF135Q8IUD6 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF135Q8IUD6 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.88□□□□□ -1.47
RNF135Q8IUD6 SNORA23-201ENST00000365128 182 ntBASIC5.88□□□□□ -1.47
RNF135Q8IUD6 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF135Q8IUD6 Y_RNA.461-201ENST00000384263 103 ntBASIC5.88□□□□□ -1.47
RNF135Q8IUD6 RNA5SP56-201ENST00000410277 118 ntBASIC5.88□□□□□ -1.47
RNF135Q8IUD6 RNU4-78P-201ENST00000410940 126 ntBASIC5.88□□□□□ -1.47
RNF135Q8IUD6 AC096664.2-201ENST00000411843 406 ntBASIC5.88□□□□□ -1.47
RNF135Q8IUD6 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.88□□□□□ -1.47
RNF135Q8IUD6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF135Q8IUD6 MRPS18CP6-201ENST00000423587 223 ntBASIC5.88□□□□□ -1.47
RNF135Q8IUD6 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.88□□□□□ -1.47
RNF135Q8IUD6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.88□□□□□ -1.47
RNF135Q8IUD6 AL389915.2-201ENST00000454576 441 ntBASIC5.88□□□□□ -1.47
RNF135Q8IUD6 AL353752.1-201ENST00000454946 260 ntBASIC5.88□□□□□ -1.47
RNF135Q8IUD6 SNORD127-201ENST00000458892 86 ntBASIC5.88□□□□□ -1.47
RNF135Q8IUD6 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.88□□□□□ -1.47
RNF135Q8IUD6 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.88□□□□□ -1.47
RNF135Q8IUD6 RN7SL570P-201ENST00000484405 292 ntBASIC5.88□□□□□ -1.47
RNF135Q8IUD6 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms