Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 HSPE1P26-201ENST00000405341 275 ntBASIC3.54□□□□□ -1.84
LDB1Q86U70 RNU6ATAC-201ENST00000408749 126 ntBASIC3.54□□□□□ -1.84
LDB1Q86U70 HSFY4P-201ENST00000415994 1181 ntBASIC3.54□□□□□ -1.84
LDB1Q86U70 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LDB1Q86U70 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.54□□□□□ -1.84
LDB1Q86U70 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.54□□□□□ -1.84
LDB1Q86U70 MTCO1P39-201ENST00000426148 480 ntBASIC3.54□□□□□ -1.84
LDB1Q86U70 AC006989.1-201ENST00000427212 131 ntBASIC3.54□□□□□ -1.84
LDB1Q86U70 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.54□□□□□ -1.84
LDB1Q86U70 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.54□□□□□ -1.84
LDB1Q86U70 AC007389.2-201ENST00000434630 306 ntBASIC3.54□□□□□ -1.84
LDB1Q86U70 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.54□□□□□ -1.84
LDB1Q86U70 UBE2V1P13-201ENST00000436983 439 ntBASIC3.54□□□□□ -1.84
LDB1Q86U70 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.54□□□□□ -1.84
LDB1Q86U70 RPS3AP46-201ENST00000448352 682 ntBASIC3.54□□□□□ -1.84
LDB1Q86U70 AC234775.1-201ENST00000454247 670 ntBASIC3.54□□□□□ -1.84
LDB1Q86U70 VN1R17P-201ENST00000472048 1090 ntBASIC3.54□□□□□ -1.84
LDB1Q86U70 HMGN1P11-201ENST00000508668 303 ntBASIC3.54□□□□□ -1.84
LDB1Q86U70 RNU1-45P-201ENST00000517191 141 ntBASIC3.54□□□□□ -1.84
LDB1Q86U70 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.54□□□□□ -1.84
LDB1Q86U70 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.54□□□□□ -1.84
LDB1Q86U70 AP006245.1-201ENST00000522549 120 ntBASIC3.54□□□□□ -1.84
LDB1Q86U70 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.54□□□□□ -1.84
LDB1Q86U70 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.54□□□□□ -1.84
LDB1Q86U70 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.54□□□□□ -1.84
LDB1Q86U70 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.54□□□□□ -1.84
LDB1Q86U70 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
LDB1Q86U70 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.54□□□□□ -1.84
LDB1Q86U70 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.54□□□□□ -1.84
LDB1Q86U70 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.54□□□□□ -1.84
LDB1Q86U70 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.54□□□□□ -1.84
LDB1Q86U70 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.54□□□□□ -1.84
LDB1Q86U70 FAM60BP-201ENST00000578364 658 ntBASIC3.54□□□□□ -1.84
LDB1Q86U70 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.54□□□□□ -1.84
LDB1Q86U70 AC006130.2-201ENST00000586202 326 ntBASIC3.54□□□□□ -1.84
LDB1Q86U70 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.54□□□□□ -1.84
LDB1Q86U70 WISP1-OT1-201ENST00000602893 642 ntBASIC3.54□□□□□ -1.84
LDB1Q86U70 AL022099.1-201ENST00000604551 712 ntBASIC3.54□□□□□ -1.84
LDB1Q86U70 AL034351.1-201ENST00000605288 668 ntBASIC3.54□□□□□ -1.84
LDB1Q86U70 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.54□□□□□ -1.84
LDB1Q86U70 AC034229.5-201ENST00000624258 185 ntBASIC3.54□□□□□ -1.84
LDB1Q86U70 AC048347.1-201ENST00000624621 427 ntBASIC3.54□□□□□ -1.84
LDB1Q86U70 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.54□□□□□ -1.84
LDB1Q86U70 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.54□□□□□ -1.84
LDB1Q86U70 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.54□□□□□ -1.84
LDB1Q86U70 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.54□□□□□ -1.84
LDB1Q86U70 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LDB1Q86U70 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LDB1Q86U70 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.54□□□□□ -1.84
LDB1Q86U70 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LDB1Q86U70 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.53□□□□□ -1.84
LDB1Q86U70 GABPAP-201ENST00000419271 1356 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
LDB1Q86U70 AL133383.2-201ENST00000622958 2336 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LDB1Q86U70 AC068647.1-201ENST00000489539 2265 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 FRG1CP-201ENST00000358464 769 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LDB1Q86U70 RNU6-173P-201ENST00000364215 104 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
LDB1Q86U70 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
LDB1Q86U70 RNU6-882P-201ENST00000391025 103 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 RPL21P17-201ENST00000397467 475 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 U3.39-201ENST00000408569 239 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 RN7SKP53-201ENST00000411337 315 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 RHEBP3-201ENST00000411920 351 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 ATP5A1P2-201ENST00000412323 255 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 RAB9AP3-201ENST00000412737 573 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 RPS27AP14-201ENST00000422868 454 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.53□□□□□ -1.84
LDB1Q86U70 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.53□□□□□ -1.84
LDB1Q86U70 AL512286.1-201ENST00000439244 400 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 FAM103A2P-201ENST00000444122 354 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 AC239367.2-201ENST00000447309 705 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.53□□□□□ -1.84
LDB1Q86U70 RAB9AP1-201ENST00000449393 573 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.53□□□□□ -1.84
LDB1Q86U70 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.53□□□□□ -1.84
LDB1Q86U70 RPL23AP62-201ENST00000463396 453 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 RPL21P104-201ENST00000464143 478 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 TMED11P-201ENST00000479478 690 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 RPS3AP43-201ENST00000479743 781 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 AC104619.4-201ENST00000510773 249 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 AC023632.4-201ENST00000517783 191 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.53□□□□□ -1.84
LDB1Q86U70 SNRPGP16-201ENST00000533275 226 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.53□□□□□ -1.84
LDB1Q86U70 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.53□□□□□ -1.84
LDB1Q86U70 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.53□□□□□ -1.84
LDB1Q86U70 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LDB1Q86U70 AC011260.1-201ENST00000578420 472 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 MIR3915-201ENST00000578518 97 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.53□□□□□ -1.84
LDB1Q86U70 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LDB1Q86U70 BCRP9-201ENST00000605312 388 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 AL392048.1-201ENST00000613946 534 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 AL355810.1-201ENST00000614629 552 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 AC008443.7-201ENST00000622195 246 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 AC079597.1-201ENST00000624306 508 ntBASIC3.53□□□□□ -1.84
LDB1Q86U70 AC007494.3-201ENST00000624660 743 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms