Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RNA5SP344-201ENST00000411081 104 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 HMGB3P10-201ENST00000434734 572 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 AC244505.4-201ENST00000434905 287 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 SSXP5-201ENST00000443473 287 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 AP000705.1-201ENST00000454567 350 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 RNA5SP385-201ENST00000515947 110 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 SNORA70.14-201ENST00000516205 110 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 AC087441.2-201ENST00000529141 262 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 AL391813.2-201ENST00000609113 322 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.31□□□□□ -2.2
CSMD3Q7Z407 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CSMD3Q7Z407 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 AC092832.1-201ENST00000422934 400 ntBASIC1.3□□□□□ -2.2
CSMD3Q7Z407 AC129850.1-201ENST00000436203 508 ntBASIC1.3□□□□□ -2.2
CSMD3Q7Z407 ARPC3P1-201ENST00000437218 533 ntBASIC1.3□□□□□ -2.2
CSMD3Q7Z407 SNRPFP2-201ENST00000440710 251 ntBASIC1.3□□□□□ -2.2
CSMD3Q7Z407 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 UBE2L2-201ENST00000254302 429 ntBASIC1.3□□□□□ -2.2
CSMD3Q7Z407 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 SNORD88.1-201ENST00000408684 91 ntBASIC1.3□□□□□ -2.2
CSMD3Q7Z407 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 AC008526.1-201ENST00000509149 338 ntBASIC1.3□□□□□ -2.2
CSMD3Q7Z407 PTP4A1P6-201ENST00000531034 478 ntBASIC1.3□□□□□ -2.2
CSMD3Q7Z407 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 AC011155.1-201ENST00000316512 456 ntBASIC1.3□□□□□ -2.2
CSMD3Q7Z407 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 AL627390.1-201ENST00000396055 340 ntBASIC1.3□□□□□ -2.2
CSMD3Q7Z407 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 RNU2-37P-201ENST00000410695 177 ntBASIC1.3□□□□□ -2.2
CSMD3Q7Z407 AC027124.2-201ENST00000428249 105 ntBASIC1.3□□□□□ -2.2
CSMD3Q7Z407 HMGB1P27-201ENST00000431429 603 ntBASIC1.3□□□□□ -2.2
CSMD3Q7Z407 AC011352.3-201ENST00000505162 593 ntBASIC1.3□□□□□ -2.2
CSMD3Q7Z407 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 TTC39CP1-201ENST00000512513 755 ntBASIC1.3□□□□□ -2.2
CSMD3Q7Z407 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 RPL23AP61-201ENST00000623642 466 ntBASIC1.3□□□□□ -2.2
CSMD3Q7Z407 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 AC233981.2-201ENST00000611524 1614 ntBASIC1.3□□□□□ -2.2
CSMD3Q7Z407 MTCO1P14-201ENST00000441695 1559 ntBASIC1.3□□□□□ -2.2
CSMD3Q7Z407 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.3□□□□□ -2.2
CSMD3Q7Z407 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CSMD3Q7Z407 AC092447.7-201ENST00000422212 1621 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC1.29□□□□□ -2.2
CSMD3Q7Z407 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
CSMD3Q7Z407 AC092326.2-201ENST00000624772 1561 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 AL391987.6-201ENST00000305671 199 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 RNA5SP167-201ENST00000365461 116 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 MTND2P2-201ENST00000434633 945 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC1.29□□□□□ -2.2
CSMD3Q7Z407 PIGFP3-201ENST00000441918 722 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 AC017099.1-201ENST00000448261 1028 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 RNU6-717P-201ENST00000459076 104 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC1.29□□□□□ -2.2
CSMD3Q7Z407 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.29□□□□□ -2.2
CSMD3Q7Z407 ARL4AP2-201ENST00000507378 601 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 AC006390.1-201ENST00000508068 283 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 SNORD116-26-201ENST00000516006 96 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.29□□□□□ -2.2
CSMD3Q7Z407 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.29□□□□□ -2.2
CSMD3Q7Z407 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 MTND5P7-201ENST00000413558 1798 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
CSMD3Q7Z407 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CSMD3Q7Z407 EXOC5P1-201ENST00000510543 1969 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CSMD3Q7Z407 LDHBP3-201ENST00000514909 822 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC1.29□□□□□ -2.2
CSMD3Q7Z407 AC022634.1-201ENST00000520765 532 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 CBX3P5-201ENST00000552017 521 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.29□□□□□ -2.2
CSMD3Q7Z407 VN1R7P-201ENST00000619242 903 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CSMD3Q7Z407 AC092881.1-201ENST00000638218 2733 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 CASP3P1-201ENST00000446037 609 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 NDUFB4P9-201ENST00000511646 388 ntBASIC1.29□□□□□ -2.2
CSMD3Q7Z407 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.29□□□□□ -2.2
CSMD3Q7Z407 AC023043.3-201ENST00000593113 385 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms