Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 AC067805.1-201ENST00000559344 470 ntBASIC2.91□□□□□ -1.94
USP50Q70EL3 AC009220.3-201ENST00000604318 586 ntBASIC2.91□□□□□ -1.94
USP50Q70EL3 AC020658.4-201ENST00000613987 684 ntBASIC2.91□□□□□ -1.94
USP50Q70EL3 AC073348.1-201ENST00000623002 331 ntBASIC2.91□□□□□ -1.94
USP50Q70EL3 CR381653.2-201ENST00000624041 768 ntBASIC2.91□□□□□ -1.94
USP50Q70EL3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.91□□□□□ -1.94
USP50Q70EL3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.91□□□□□ -1.94
USP50Q70EL3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.91□□□□□ -1.94
USP50Q70EL3 MTND5P6-201ENST00000422338 1798 ntBASIC2.91□□□□□ -1.94
USP50Q70EL3 AC080128.1-201ENST00000474389 1917 ntBASIC2.91□□□□□ -1.94
USP50Q70EL3 RNU6-629P-201ENST00000384061 103 ntBASIC2.9□□□□□ -1.95
USP50Q70EL3 RNU6-40P-201ENST00000384254 107 ntBASIC2.9□□□□□ -1.95
USP50Q70EL3 HMGN2P35-201ENST00000412164 270 ntBASIC2.9□□□□□ -1.95
USP50Q70EL3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.9□□□□□ -1.95
USP50Q70EL3 RN7SL75P-201ENST00000461926 281 ntBASIC2.9□□□□□ -1.95
USP50Q70EL3 RPL23AP42-201ENST00000471152 471 ntBASIC2.9□□□□□ -1.95
USP50Q70EL3 TRBV1-201ENST00000476502 284 ntBASIC2.9□□□□□ -1.95
USP50Q70EL3 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.9□□□□□ -1.95
USP50Q70EL3 SNORA31.1-201ENST00000515993 133 ntBASIC2.9□□□□□ -1.95
USP50Q70EL3 SNORA31.5-201ENST00000516190 133 ntBASIC2.9□□□□□ -1.95
USP50Q70EL3 HSPE1P20-201ENST00000538133 289 ntBASIC2.9□□□□□ -1.95
USP50Q70EL3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.9□□□□□ -1.95
USP50Q70EL3 SNRPGP18-201ENST00000553000 214 ntBASIC2.9□□□□□ -1.95
USP50Q70EL3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.9□□□□□ -1.95
USP50Q70EL3 MTCYBP28-201ENST00000566728 1132 ntBASIC2.9□□□□□ -1.95
USP50Q70EL3 AC083760.1-201ENST00000589621 670 ntBASIC2.9□□□□□ -1.95
USP50Q70EL3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.9□□□□□ -1.95
USP50Q70EL3 AC016727.1-205ENST00000605437 569 ntBASIC2.9□□□□□ -1.95
USP50Q70EL3 AC008962.1-201ENST00000605729 304 ntBASIC2.9□□□□□ -1.95
USP50Q70EL3 AC020923.1-201ENST00000624021 917 ntBASIC2.9□□□□□ -1.95
USP50Q70EL3 MIR1291-201ENST00000627649 87 ntBASIC2.9□□□□□ -1.95
USP50Q70EL3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.9□□□□□ -1.95
USP50Q70EL3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
USP50Q70EL3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
USP50Q70EL3 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
USP50Q70EL3 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
USP50Q70EL3 CD24P4-201ENST00000382840 243 ntBASIC2.89□□□□□ -1.95
USP50Q70EL3 RPL21P3-201ENST00000395517 478 ntBASIC2.89□□□□□ -1.95
USP50Q70EL3 Z96811.1-201ENST00000445880 108 ntBASIC2.89□□□□□ -1.95
USP50Q70EL3 HMGN1P5-201ENST00000448591 263 ntBASIC2.89□□□□□ -1.95
USP50Q70EL3 HMGB1P15-201ENST00000453854 435 ntBASIC2.89□□□□□ -1.95
USP50Q70EL3 HMGB1P25-201ENST00000468402 607 ntBASIC2.89□□□□□ -1.95
USP50Q70EL3 AP004217.1-201ENST00000480579 346 ntBASIC2.89□□□□□ -1.95
USP50Q70EL3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.89□□□□□ -1.95
USP50Q70EL3 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
USP50Q70EL3 AC098799.2-201ENST00000509466 868 ntBASIC2.89□□□□□ -1.95
USP50Q70EL3 AC008885.2-201ENST00000509506 930 ntBASIC2.89□□□□□ -1.95
USP50Q70EL3 AC116337.1-201ENST00000509680 687 ntBASIC2.89□□□□□ -1.95
USP50Q70EL3 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.89□□□□□ -1.95
USP50Q70EL3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.89□□□□□ -1.95
USP50Q70EL3 AC091057.2-201ENST00000602594 792 ntBASIC2.89□□□□□ -1.95
USP50Q70EL3 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
USP50Q70EL3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
USP50Q70EL3 MIR6873-201ENST00000622788 63 ntBASIC2.89□□□□□ -1.95
USP50Q70EL3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.89□□□□□ -1.95
USP50Q70EL3 MTND5P19-201ENST00000424872 1794 ntBASIC2.89□□□□□ -1.95
USP50Q70EL3 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
USP50Q70EL3 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
USP50Q70EL3 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
USP50Q70EL3 Y_RNA.4-201ENST00000362333 112 ntBASIC2.88□□□□□ -1.95
USP50Q70EL3 SNORA14A-201ENST00000364773 135 ntBASIC2.88□□□□□ -1.95
USP50Q70EL3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
USP50Q70EL3 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
USP50Q70EL3 MTATP6P4-201ENST00000427725 675 ntBASIC2.88□□□□□ -1.95
USP50Q70EL3 YWHAZP8-201ENST00000436935 731 ntBASIC2.88□□□□□ -1.95
USP50Q70EL3 AC068135.1-201ENST00000446164 246 ntBASIC2.88□□□□□ -1.95
USP50Q70EL3 RPS29P12-201ENST00000460178 152 ntBASIC2.88□□□□□ -1.95
USP50Q70EL3 AC068587.2-201ENST00000478386 781 ntBASIC2.88□□□□□ -1.95
USP50Q70EL3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.88□□□□□ -1.95
USP50Q70EL3 RPL36AP51-201ENST00000487216 318 ntBASIC2.88□□□□□ -1.95
USP50Q70EL3 FAM172BP-201ENST00000487497 1089 ntBASIC2.88□□□□□ -1.95
USP50Q70EL3 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.88□□□□□ -1.95
USP50Q70EL3 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.88□□□□□ -1.95
USP50Q70EL3 RNA5SP76-201ENST00000516277 87 ntBASIC2.88□□□□□ -1.95
USP50Q70EL3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.88□□□□□ -1.95
USP50Q70EL3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.88□□□□□ -1.95
USP50Q70EL3 AL133271.1-201ENST00000538229 291 ntBASIC2.88□□□□□ -1.95
USP50Q70EL3 AC018630.1-201ENST00000541376 925 ntBASIC2.88□□□□□ -1.95
USP50Q70EL3 AC012414.2-201ENST00000559474 187 ntBASIC2.88□□□□□ -1.95
USP50Q70EL3 OR4G1P-201ENST00000588632 938 ntBASIC2.88□□□□□ -1.95
USP50Q70EL3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.88□□□□□ -1.95
USP50Q70EL3 AL009028.1-201ENST00000604895 802 ntBASIC2.88□□□□□ -1.95
USP50Q70EL3 AC002076.2-201ENST00000617362 122 ntBASIC2.88□□□□□ -1.95
USP50Q70EL3 AC006963.1-201ENST00000624003 1052 ntBASIC2.88□□□□□ -1.95
USP50Q70EL3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
USP50Q70EL3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
USP50Q70EL3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.88□□□□□ -1.95
USP50Q70EL3 AC016716.1-201ENST00000265882 708 ntBASIC2.87□□□□□ -1.95
USP50Q70EL3 OR5T3-201ENST00000303059 1023 ntBASIC2.87□□□□□ -1.95
USP50Q70EL3 RNU6-1159P-201ENST00000362933 107 ntBASIC2.87□□□□□ -1.95
USP50Q70EL3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.87□□□□□ -1.95
USP50Q70EL3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
USP50Q70EL3 DSTNP4-201ENST00000399472 474 ntBASIC2.87□□□□□ -1.95
USP50Q70EL3 AL390023.1-201ENST00000428836 262 ntBASIC2.87□□□□□ -1.95
USP50Q70EL3 XKRY2-201ENST00000442362 1093 ntBASIC2.87□□□□□ -1.95
USP50Q70EL3 RPL39P40-201ENST00000445481 146 ntBASIC2.87□□□□□ -1.95
USP50Q70EL3 RPS24P6-201ENST00000452670 400 ntBASIC2.87□□□□□ -1.95
USP50Q70EL3 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.87□□□□□ -1.95
USP50Q70EL3 snoU13.3-201ENST00000459441 104 ntBASIC2.87□□□□□ -1.95
USP50Q70EL3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms