Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RNU6-740P-201ENST00000364734 105 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 RNU6-48P-201ENST00000384161 107 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 SNORD58.1-201ENST00000391313 66 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AC005042.1-201ENST00000393397 800 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 RNU6-1203P-201ENST00000410703 110 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 RPL35AP3-201ENST00000414680 288 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 C4BPAP2-201ENST00000428434 478 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 HMGB3P24-201ENST00000433260 622 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 RPL21P112-201ENST00000434403 463 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 RNU7-167P-201ENST00000459160 62 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AC110792.1-201ENST00000491826 472 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AC092436.3-201ENST00000511788 257 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 RNU6-346P-201ENST00000516288 111 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 RNU6-64P-201ENST00000517119 105 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AC025423.5-201ENST00000550230 219 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AL133153.1-201ENST00000557756 303 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AC109446.1-201ENST00000566172 220 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 RPL23AP84-201ENST00000571193 464 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 MIR7853-201ENST00000584820 132 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 SUMO2P15-201ENST00000604285 278 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AC008162.1-201ENST00000604718 254 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AL670379.4-201ENST00000605279 254 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AC145423.1-201ENST00000605712 336 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AC004832.4-201ENST00000608952 331 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AC009570.1-201ENST00000609599 745 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AC021753.1-201ENST00000635724 168 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 AL359893.1-201ENST00000447628 1580 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 GVINP1-202ENST00000531871 7271 ntBASIC5.7□□□□□ -1.5
FOXR1Q6PIV2 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 OR13C1P-202ENST00000641378 2919 ntBASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 Y_RNA.54-201ENST00000362766 105 ntBASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 Y_RNA.277-201ENST00000364754 102 ntBASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 Y_RNA.399-201ENST00000383955 105 ntBASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 RNU6-130P-201ENST00000411112 103 ntBASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 Y_RNA.793-201ENST00000411222 111 ntBASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 UBE2D3P2-201ENST00000424409 445 ntBASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 AL662874.1-201ENST00000426065 230 ntBASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 RPL36AP6-201ENST00000435770 321 ntBASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 AL163193.1-201ENST00000444895 788 ntBASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 FTH1P2-201ENST00000466086 412 ntBASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 AC006967.1-201ENST00000467608 589 ntBASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 RPL7P49-201ENST00000471402 708 ntBASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 RPL17P19-201ENST00000489069 552 ntBASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 AC074198.2-201ENST00000508153 258 ntBASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 RNU2-69P-201ENST00000516061 100 ntBASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 RNU6-685P-201ENST00000517088 95 ntBASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 SNORA43.3-201ENST00000517240 103 ntBASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 AL133271.1-201ENST00000538229 291 ntBASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 HMGN2P28-201ENST00000606102 262 ntBASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
FOXR1Q6PIV2 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 AC011978.2-201ENST00000569835 2054 ntBASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.68□□□□□ -1.5
FOXR1Q6PIV2 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms