Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 UBE2FP1-201ENST00000416536 447 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 AC002075.2-201ENST00000425207 252 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 AC234781.2-201ENST00000426370 994 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 ARPC3P1-201ENST00000437218 533 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 CR769776.1-201ENST00000441254 787 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 RPS29P31-201ENST00000446147 164 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 RNU6-420P-201ENST00000458780 107 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 AC010460.1-201ENST00000507087 466 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 SLC25A15P5-201ENST00000508033 253 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 MTND4LP31-201ENST00000514859 294 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 RNU6-390P-201ENST00000516259 103 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 OR5G4P-201ENST00000525251 760 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 TRAV37-201ENST00000553906 342 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 MIR1254-2-201ENST00000579553 63 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 AC060771.1-201ENST00000582031 164 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 BNIP3P40-201ENST00000596017 556 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 AC114878.2-201ENST00000604863 1251 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 RNU6-88P-201ENST00000606801 100 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.3□□□□□ -1.88
C11orf88Q6PI97 AC087359.1-201ENST00000508335 1740 ntBASIC3.3□□□□□ -1.88
C11orf88Q6PI97 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 RNU6-462P-201ENST00000362659 105 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AL391417.1-201ENST00000404100 426 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 RNU6ATAC-201ENST00000408749 126 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 RN7SKP159-201ENST00000410657 292 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 NDUFB4P7-201ENST00000423198 363 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AL358472.1-201ENST00000431295 329 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AC007389.2-201ENST00000434630 306 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AC091862.1-201ENST00000438016 1100 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AC122718.1-201ENST00000439448 744 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AC108734.1-201ENST00000439549 399 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 MTCO1P27-201ENST00000448269 226 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 RPL21P11-201ENST00000461458 483 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 FAM133DP-201ENST00000464802 691 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 TRBV12-2-201ENST00000489763 344 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AC104685.1-201ENST00000502445 371 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 RNU6-311P-201ENST00000516224 102 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 SCARNA15.2-201ENST00000516409 127 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 MTND1P6-201ENST00000523621 946 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AP002748.2-201ENST00000528671 348 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AF038458.1-201ENST00000588406 262 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AC006539.2-201ENST00000601729 572 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AC068313.1-201ENST00000604028 1008 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AP000676.4-201ENST00000624659 623 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 MIR4275-201ENST00000636486 87 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 AC103706.2-201ENST00000638080 240 ntBASIC3.29□□□□□ -1.88
C11orf88Q6PI97 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
C11orf88Q6PI97 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms