Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 AC114546.3-201ENST00000623582 1734 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 AC092326.2-201ENST00000624772 1561 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 AC027287.1-201ENST00000553115 1453 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 MTND4P23-201ENST00000447723 1363 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 RNU6-984P-201ENST00000363236 109 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 RNU6-289P-201ENST00000364093 107 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 RNU6-952P-201ENST00000391164 108 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 RNU6-876P-201ENST00000391295 104 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 DHFRP6-201ENST00000401776 268 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 HMGB3P20-201ENST00000417997 600 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 RSL24D1P6-201ENST00000426934 401 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 YWHAZP8-201ENST00000436935 731 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 VWA8P1-201ENST00000510889 176 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 AC005798.1-201ENST00000513715 387 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 MTCO1P35-201ENST00000515270 228 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 RNU6-488P-201ENST00000515918 99 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 RNU6-1003P-201ENST00000517099 105 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 TOMM20P2-201ENST00000540082 421 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 AC060780.3-201ENST00000589464 80 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 AL391646.1-201ENST00000603860 190 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 AC123768.4-201ENST00000616244 701 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 MIR6500-201ENST00000622700 86 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 RNA5SP196-201ENST00000625967 102 ntBASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF549Q6P9A3 NCAPGP1-201ENST00000505112 1814 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 AC134882.1-201ENST00000603738 1676 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 AP002907.1-201ENST00000606361 1430 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 AC138915.3-201ENST00000562908 1389 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 CBX3P1-201ENST00000325243 554 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 RNU4-76P-201ENST00000364509 141 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 RNU6-343P-201ENST00000364709 104 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 RNY4P34-201ENST00000364779 95 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 RNU6-444P-201ENST00000383988 108 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 Y_RNA.409-201ENST00000383990 98 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 RNU6-921P-201ENST00000384361 107 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 HMGN2P8-201ENST00000391458 268 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 PRRC2CP1-201ENST00000404428 159 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 MTCO1P20-201ENST00000425366 358 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 AL589872.1-201ENST00000426602 288 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 AL117339.2-201ENST00000430475 180 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 SNORA71B-202ENST00000439232 272 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 AC114755.5-201ENST00000447760 831 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 AL162151.2-201ENST00000448875 158 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 UBDP1-202ENST00000457888 382 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 RPL31P50-201ENST00000471002 296 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 TRBV12-2-201ENST00000489763 344 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 AC112204.1-201ENST00000502591 103 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 RAC1P2-201ENST00000511164 579 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 RNA5SP208-201ENST00000516156 78 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 Y_RNA.704-201ENST00000516851 102 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 RNU6-352P-201ENST00000516908 107 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 AC109635.3-201ENST00000529536 185 ntBASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF549Q6P9A3 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms