Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 COX6B1P1-201ENST00000415962 213 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 PDSS1P1-201ENST00000422953 1114 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 RPL23AP74-201ENST00000437246 471 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF43Q68DV7 DYNLT3P2-201ENST00000442517 295 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 AL392103.1-201ENST00000447000 198 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF43Q68DV7 RNU6-1132P-201ENST00000459214 107 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 RN7SL591P-201ENST00000496150 292 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 RNU6-470P-201ENST00000515954 104 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 RNU6-1016P-201ENST00000516689 94 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF43Q68DV7 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF43Q68DV7 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF43Q68DV7 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF43Q68DV7 AL627230.1-201ENST00000613077 211 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF43Q68DV7 AL591926.8-201ENST00000616876 211 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 AC010378.1-201ENST00000619270 362 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 AL159972.1-201ENST00000625150 448 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 AC097063.1-201ENST00000426714 1797 ntBASIC5.33□□□□□ -1.56
RNF43Q68DV7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF43Q68DV7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF43Q68DV7 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF43Q68DV7 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF43Q68DV7 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF43Q68DV7 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF43Q68DV7 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF43Q68DV7 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF43Q68DV7 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF43Q68DV7 AC093849.1-201ENST00000563631 2209 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF43Q68DV7 CASC19-204ENST00000641001 2055 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RNF43Q68DV7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF43Q68DV7 RNU1-32P-201ENST00000363937 159 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 RNVU1-6-201ENST00000364688 164 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RNF43Q68DV7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF43Q68DV7 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF43Q68DV7 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF43Q68DV7 Y_RNA.404-201ENST00000383978 102 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 Y_RNA.485-201ENST00000384395 102 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 RNU6-328P-201ENST00000390887 106 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF43Q68DV7 AL391417.1-201ENST00000404100 426 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 AL078604.1-201ENST00000404609 466 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 AC008280.1-201ENST00000418851 412 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF43Q68DV7 MED13P1-201ENST00000428342 171 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 MTND5P15-201ENST00000434246 349 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 CBX1P4-201ENST00000439415 457 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF43Q68DV7 OR1H1P-201ENST00000448731 937 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF43Q68DV7 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF43Q68DV7 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF43Q68DV7 HMGB3P16-201ENST00000508037 287 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 TXNP6-201ENST00000510190 310 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF43Q68DV7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF43Q68DV7 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF43Q68DV7 MIR3128-201ENST00000581957 66 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF43Q68DV7 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF43Q68DV7 AC078899.3-201ENST00000599065 212 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 AC092747.3-201ENST00000603769 301 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 AC008745.1-201ENST00000604064 271 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 AL031666.3-201ENST00000609320 1006 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 AC093799.2-201ENST00000610062 578 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 AL161616.1-201ENST00000611867 286 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 MIR6128-201ENST00000615528 109 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 AC015967.1-201ENST00000619893 476 ntBASIC5.32□□□□□ -1.56
RNF43Q68DV7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF43Q68DV7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF43Q68DV7 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RNF43Q68DV7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF43Q68DV7 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF43Q68DV7 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF43Q68DV7 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF43Q68DV7 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF43Q68DV7 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF43Q68DV7 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF43Q68DV7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF43Q68DV7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF43Q68DV7 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RNF43Q68DV7 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF43Q68DV7 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF43Q68DV7 RNU6-490P-201ENST00000362985 107 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 RNU1-85P-201ENST00000364127 164 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.31□□□□□ -1.56
RNF43Q68DV7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RNF43Q68DV7 RNU6-641P-201ENST00000384006 107 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 RNA5SP87-201ENST00000384155 118 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 Y_RNA.473-201ENST00000384333 102 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 Y_RNA.515-201ENST00000384535 112 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 MIR600-201ENST00000385007 98 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 AL109755.1-201ENST00000401791 649 ntBASIC5.31□□□□□ -1.56
RNF43Q68DV7 POLHP1-201ENST00000411806 470 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms