Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 FRG1KP-201ENST00000623592 341 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 AC116667.1-201ENST00000604855 2072 ntBASIC4.18□□□□□ -1.74
RNF220Q5VTB9 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF220Q5VTB9 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC021146.4-201ENST00000309229 279 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 RNU6-282P-201ENST00000365357 103 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 RNU2-71P-201ENST00000411395 189 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 FCF1P9-201ENST00000412546 282 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC073464.1-201ENST00000429823 534 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 USP12PX-201ENST00000432383 1057 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AL451074.3-201ENST00000437709 472 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC006480.1-201ENST00000449887 378 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 PSPHP1-201ENST00000450062 261 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 SNORD97-201ENST00000459187 142 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC092324.1-201ENST00000468671 324 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 RPS27AP1-201ENST00000475545 471 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC108860.1-201ENST00000484521 383 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC083982.1-201ENST00000485679 344 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC010460.1-201ENST00000507087 466 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 RN7SKP244-201ENST00000516513 307 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 RNA5SP143-201ENST00000516936 115 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 RNU6-840P-201ENST00000517275 65 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AP003072.2-201ENST00000527756 676 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 MED28P6-201ENST00000558776 231 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 RPL21P12-201ENST00000559810 515 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC007684.1-201ENST00000609671 477 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC244100.1-202ENST00000621554 382 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC091905.1-201ENST00000624400 311 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 AC116096.1-201ENST00000566804 2314 ntBASIC4.17□□□□□ -1.74
RNF220Q5VTB9 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.17□□□□□ -1.74
RNF220Q5VTB9 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF220Q5VTB9 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF220Q5VTB9 AC010928.1-201ENST00000592477 1447 ntBASIC4.16□□□□□ -1.74
RNF220Q5VTB9 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF220Q5VTB9 RNU6-517P-201ENST00000384362 110 ntBASIC4.16□□□□□ -1.74
RNF220Q5VTB9 RNA5SP397-201ENST00000391323 118 ntBASIC4.16□□□□□ -1.74
RNF220Q5VTB9 MIR298-201ENST00000401212 88 ntBASIC4.16□□□□□ -1.74
RNF220Q5VTB9 SNORA74C-2-201ENST00000411179 201 ntBASIC4.16□□□□□ -1.74
RNF220Q5VTB9 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.16□□□□□ -1.74
RNF220Q5VTB9 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.16□□□□□ -1.74
RNF220Q5VTB9 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.16□□□□□ -1.74
RNF220Q5VTB9 AC140076.1-201ENST00000449897 361 ntBASIC4.16□□□□□ -1.74
RNF220Q5VTB9 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.16□□□□□ -1.74
RNF220Q5VTB9 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.16□□□□□ -1.74
RNF220Q5VTB9 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.16□□□□□ -1.74
RNF220Q5VTB9 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.16□□□□□ -1.74
RNF220Q5VTB9 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.16□□□□□ -1.74
RNF220Q5VTB9 RN7SL585P-201ENST00000470538 280 ntBASIC4.16□□□□□ -1.74
RNF220Q5VTB9 AC010631.1-201ENST00000474150 156 ntBASIC4.16□□□□□ -1.74
RNF220Q5VTB9 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.16□□□□□ -1.74
RNF220Q5VTB9 SAP18P1-201ENST00000512058 390 ntBASIC4.16□□□□□ -1.74
RNF220Q5VTB9 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.16□□□□□ -1.74
RNF220Q5VTB9 GMPSP1-201ENST00000514075 579 ntBASIC4.16□□□□□ -1.74
RNF220Q5VTB9 MTND1P5-201ENST00000517906 940 ntBASIC4.16□□□□□ -1.74
RNF220Q5VTB9 FAM92A1P1-201ENST00000528023 890 ntBASIC4.16□□□□□ -1.74
RNF220Q5VTB9 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.16□□□□□ -1.74
RNF220Q5VTB9 AC093012.1-202ENST00000549403 582 ntBASIC4.16□□□□□ -1.74
RNF220Q5VTB9 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.16□□□□□ -1.74
RNF220Q5VTB9 RN7SL690P-201ENST00000582087 240 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms