Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 FCF1P3-201ENST00000496394 590 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 FAM92A1P2-202ENST00000504766 877 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AC139783.2-201ENST00000504847 1145 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 FTH1P21-201ENST00000512179 511 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 RNA5SP73-201ENST00000516744 108 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 RN7SKP116-201ENST00000516902 319 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AC022616.6-201ENST00000520479 119 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 IGLV3-26-201ENST00000520756 302 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 IFITM8P-201ENST00000522529 394 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AP003497.1-201ENST00000528472 562 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AP003385.6-201ENST00000531603 374 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AC118273.2-201ENST00000532092 465 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 SNORA59B-202ENST00000578183 701 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 MIR3944-201ENST00000581277 108 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AC008739.3-201ENST00000603262 127 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 LLPHP1-201ENST00000603571 367 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AL365503.1-201ENST00000605247 905 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AP000860.1-201ENST00000605250 559 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 OR10AB1P-201ENST00000609613 938 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AL590099.1-201ENST00000615276 138 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AL445363.3-201ENST00000623080 671 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 CR392039.5-201ENST00000623201 510 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 AC006065.5-201ENST00000623427 349 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 CR381653.2-201ENST00000624041 768 ntBASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
SLC44A4Q53GD3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 PNPT1P2-201ENST00000456768 2050 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 Y_RNA.256-201ENST00000364594 104 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 RNU6-821P-201ENST00000390995 107 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AC097374.1-203ENST00000400783 485 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 FCF1P10-201ENST00000407590 479 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 MIR1250-201ENST00000408098 113 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 RNU2-47P-201ENST00000410649 186 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 C1DP2-201ENST00000418167 426 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AL109913.1-201ENST00000421173 514 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AL589872.1-201ENST00000426602 288 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 RPL21P91-201ENST00000429231 479 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 RPS6P12-201ENST00000432491 726 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 GOT2P5-201ENST00000433995 546 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 SNRPEP8-201ENST00000442866 260 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 Z99127.3-201ENST00000448158 395 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AC098824.1-201ENST00000453565 980 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 HMGB1P25-201ENST00000468402 607 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 RPL21P103-201ENST00000479921 488 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AC021382.1-201ENST00000483523 359 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AC012170.1-201ENST00000495139 359 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 PTGES3P3-201ENST00000511479 482 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AC074344.1-201ENST00000512823 224 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 RNU2-46P-201ENST00000517038 113 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AC107016.1-201ENST00000550463 337 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AC091178.1-203ENST00000584586 279 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AL606490.9-201ENST00000603331 271 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AL022154.1-201ENST00000604698 785 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 HMGN2P28-201ENST00000606102 262 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AL355472.4-201ENST00000610233 626 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AC138649.3-201ENST00000622154 254 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 AL133412.1-201ENST00000380194 2992 ntBASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SLC44A4Q53GD3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC008725.1-201ENST00000605123 2263 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms