Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC111000.2-201ENST00000507775 550 ntBASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 AC026412.2-201ENST00000512270 1075 ntBASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 FABP5P12-201ENST00000515543 389 ntBASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 ERHP1-201ENST00000523006 310 ntBASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 OR5G4P-201ENST00000525251 760 ntBASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 MTND3P13-201ENST00000574391 343 ntBASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 MIR4319-201ENST00000577285 85 ntBASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 AC144521.1-201ENST00000607148 956 ntBASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 AL391262.2-201ENST00000622466 494 ntBASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 Z99496.1-201ENST00000469424 1477 ntBASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 SGO1P2-201ENST00000429458 1589 ntBASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 AC244517.1-201ENST00000606030 2086 ntBASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 CUL1P1-201ENST00000509510 2425 ntBASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 RNA5SP258-201ENST00000362750 119 ntBASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 RNU6-1066P-201ENST00000363573 105 ntBASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 SNORD65.1-201ENST00000390889 71 ntBASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 RNU6-1300P-201ENST00000391046 108 ntBASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 AL121978.1-201ENST00000402778 359 ntBASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 AC092634.6-201ENST00000418558 192 ntBASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 RPL31P12-201ENST00000422587 358 ntBASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 AC104073.1-201ENST00000451988 151 ntBASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 OR4G11P-201ENST00000492842 939 ntBASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 MTCO3P44-201ENST00000510977 541 ntBASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 SCGB1D5P-201ENST00000515134 247 ntBASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 AC090502.2-201ENST00000549267 280 ntBASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 LSM6P2-201ENST00000552208 177 ntBASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 HMGB1P6-201ENST00000569046 646 ntBASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 AC011458.1-201ENST00000604034 617 ntBASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHROOM1Q2M3G4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
SHROOM1Q2M3G4 RNU6-1249P-201ENST00000363237 111 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 ARF4P3-201ENST00000397387 509 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 RNU2-42P-201ENST00000410697 113 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 DPRXP1-201ENST00000426312 460 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AC105272.1-201ENST00000438604 198 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AC104308.1-201ENST00000454621 333 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AC069528.1-202ENST00000482888 637 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AC021146.5-201ENST00000503544 545 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 POU5F1P7-201ENST00000508759 541 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 RNA5SP367-201ENST00000516557 118 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AP001804.3-201ENST00000525146 880 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 OR10V3P-201ENST00000525712 725 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AC022690.1-201ENST00000526681 550 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AL139174.1-201ENST00000531489 886 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 MIR4509-3-201ENST00000578671 94 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 MIR4513-201ENST00000581077 86 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 MIR4509-2-201ENST00000583920 94 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 ATP1B3P1-201ENST00000605365 821 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AC008962.1-201ENST00000605729 304 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 MIR6076-201ENST00000617521 113 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 MIR4509-1-201ENST00000618224 94 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AL157770.1-201ENST00000623049 439 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AP005901.5-201ENST00000545779 1796 ntBASIC3.46□□□□□ -1.86
SHROOM1Q2M3G4 AL355596.1-201ENST00000565399 3996 ntBASIC3.45□□□□□ -1.86
SHROOM1Q2M3G4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SHROOM1Q2M3G4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SHROOM1Q2M3G4 ZNF29P-201ENST00000225587 168 ntBASIC3.45□□□□□ -1.86
SHROOM1Q2M3G4 snoZ40.1-201ENST00000364540 72 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms