Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 IGKV3-31-201ENST00000523109 329 ntBASIC1.68□□□□□ -2.14
HMGN3Q15651 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGN3Q15651 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGN3Q15651 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGN3Q15651 AP001317.1-201ENST00000531194 960 ntBASIC1.68□□□□□ -2.14
HMGN3Q15651 AP002812.4-201ENST00000532139 286 ntBASIC1.68□□□□□ -2.14
HMGN3Q15651 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.68□□□□□ -2.14
HMGN3Q15651 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HMGN3Q15651 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HMGN3Q15651 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGN3Q15651 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.68□□□□□ -2.14
HMGN3Q15651 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGN3Q15651 AC090897.2-201ENST00000581715 130 ntBASIC1.68□□□□□ -2.14
HMGN3Q15651 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGN3Q15651 MTCO3P22-201ENST00000603219 784 ntBASIC1.68□□□□□ -2.14
HMGN3Q15651 AL590099.1-201ENST00000615276 138 ntBASIC1.68□□□□□ -2.14
HMGN3Q15651 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.68□□□□□ -2.14
HMGN3Q15651 AC119674.1-212ENST00000641155 993 ntBASIC1.68□□□□□ -2.14
HMGN3Q15651 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
HMGN3Q15651 AC010733.2-201ENST00000589496 5702 ntBASIC1.67□□□□□ -2.14
HMGN3Q15651 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.67□□□□□ -2.14
HMGN3Q15651 AC013404.1-201ENST00000413068 249 ntBASIC1.67□□□□□ -2.14
HMGN3Q15651 MRPS33P4-201ENST00000434892 317 ntBASIC1.67□□□□□ -2.14
HMGN3Q15651 SNRPEP4-201ENST00000435815 279 ntBASIC1.67□□□□□ -2.14
HMGN3Q15651 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.67□□□□□ -2.14
HMGN3Q15651 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.67□□□□□ -2.14
HMGN3Q15651 MTCYBP14-201ENST00000457471 715 ntBASIC1.67□□□□□ -2.14
HMGN3Q15651 AC021205.1-201ENST00000468797 348 ntBASIC1.67□□□□□ -2.14
HMGN3Q15651 AC104687.1-201ENST00000485829 412 ntBASIC1.67□□□□□ -2.14
HMGN3Q15651 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.67□□□□□ -2.14
HMGN3Q15651 FABP5P6-201ENST00000510588 409 ntBASIC1.67□□□□□ -2.14
HMGN3Q15651 AC006499.2-201ENST00000513470 337 ntBASIC1.67□□□□□ -2.14
HMGN3Q15651 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.67□□□□□ -2.14
HMGN3Q15651 HMGB1P46-201ENST00000520062 610 ntBASIC1.67□□□□□ -2.14
HMGN3Q15651 FAM92A1P1-201ENST00000528023 890 ntBASIC1.67□□□□□ -2.14
HMGN3Q15651 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.67□□□□□ -2.14
HMGN3Q15651 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.67□□□□□ -2.14
HMGN3Q15651 AL049838.1-201ENST00000563647 981 ntBASIC1.67□□□□□ -2.14
HMGN3Q15651 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.67□□□□□ -2.14
HMGN3Q15651 AC106791.2-201ENST00000604680 391 ntBASIC1.67□□□□□ -2.14
HMGN3Q15651 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
HMGN3Q15651 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.67□□□□□ -2.14
HMGN3Q15651 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.67□□□□□ -2.14
HMGN3Q15651 RNA5SP139-201ENST00000364340 117 ntBASIC1.66□□□□□ -2.14
HMGN3Q15651 RNU6-234P-201ENST00000365229 104 ntBASIC1.66□□□□□ -2.14
HMGN3Q15651 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.66□□□□□ -2.14
HMGN3Q15651 LSM5-206ENST00000409987 504 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGN3Q15651 AL135786.1-201ENST00000415892 214 ntBASIC1.66□□□□□ -2.14
HMGN3Q15651 HMGN2P19-201ENST00000425149 265 ntBASIC1.66□□□□□ -2.14
HMGN3Q15651 AC027124.2-201ENST00000428249 105 ntBASIC1.66□□□□□ -2.14
HMGN3Q15651 AC093716.1-201ENST00000435923 377 ntBASIC1.66□□□□□ -2.14
HMGN3Q15651 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGN3Q15651 KLRA1P-201ENST00000503499 986 ntBASIC1.66□□□□□ -2.14
HMGN3Q15651 HMGB3P17-201ENST00000504195 649 ntBASIC1.66□□□□□ -2.14
HMGN3Q15651 RNU1-103P-201ENST00000516502 125 ntBASIC1.66□□□□□ -2.14
HMGN3Q15651 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGN3Q15651 CIR1P1-201ENST00000524055 1133 ntBASIC1.66□□□□□ -2.14
HMGN3Q15651 AC019227.1-201ENST00000526902 510 ntBASIC1.66□□□□□ -2.14
HMGN3Q15651 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMGN3Q15651 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGN3Q15651 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.66□□□□□ -2.14
HMGN3Q15651 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGN3Q15651 MIR1273D-201ENST00000577266 86 ntBASIC1.66□□□□□ -2.14
HMGN3Q15651 AC022884.3-201ENST00000579571 248 ntBASIC1.66□□□□□ -2.14
HMGN3Q15651 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
HMGN3Q15651 AC008739.2-201ENST00000597006 317 ntBASIC1.66□□□□□ -2.14
HMGN3Q15651 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGN3Q15651 AP004247.3-201ENST00000608682 624 ntBASIC1.66□□□□□ -2.14
HMGN3Q15651 AL162233.1-201ENST00000620014 944 ntBASIC1.66□□□□□ -2.14
HMGN3Q15651 AL162373.1-201ENST00000620433 407 ntBASIC1.66□□□□□ -2.14
HMGN3Q15651 RPL23AP61-201ENST00000623642 466 ntBASIC1.66□□□□□ -2.14
HMGN3Q15651 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGN3Q15651 MFSD8-245ENST00000641743 948 ntBASIC1.66□□□□□ -2.14
HMGN3Q15651 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.66□□□□□ -2.14
HMGN3Q15651 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.66□□□□□ -2.14
HMGN3Q15651 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMGN3Q15651 AC009902.3-201ENST00000606235 2172 ntBASIC1.65□□□□□ -2.14
HMGN3Q15651 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMGN3Q15651 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HMGN3Q15651 RNU6-50P-201ENST00000362356 103 ntBASIC1.65□□□□□ -2.15
HMGN3Q15651 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.65□□□□□ -2.15
HMGN3Q15651 AL023284.1-201ENST00000403956 276 ntBASIC1.65□□□□□ -2.15
HMGN3Q15651 MTCYBP45-201ENST00000435243 565 ntBASIC1.65□□□□□ -2.15
HMGN3Q15651 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGN3Q15651 CALM1P2-201ENST00000452941 448 ntBASIC1.65□□□□□ -2.15
HMGN3Q15651 FAM172BP-201ENST00000487497 1089 ntBASIC1.65□□□□□ -2.15
HMGN3Q15651 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.65□□□□□ -2.15
HMGN3Q15651 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.65□□□□□ -2.15
HMGN3Q15651 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.65□□□□□ -2.15
HMGN3Q15651 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
HMGN3Q15651 HMGN1P28-201ENST00000521340 364 ntBASIC1.65□□□□□ -2.15
HMGN3Q15651 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.65□□□□□ -2.15
HMGN3Q15651 AC022690.1-201ENST00000526681 550 ntBASIC1.65□□□□□ -2.15
HMGN3Q15651 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.65□□□□□ -2.15
HMGN3Q15651 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGN3Q15651 AC126177.3-201ENST00000551839 688 ntBASIC1.65□□□□□ -2.15
HMGN3Q15651 AC009220.3-201ENST00000604318 586 ntBASIC1.65□□□□□ -2.15
HMGN3Q15651 AC019131.2-201ENST00000609071 870 ntBASIC1.65□□□□□ -2.15
HMGN3Q15651 AC096586.2-201ENST00000610260 441 ntBASIC1.65□□□□□ -2.15
HMGN3Q15651 Y_RNA.783-201ENST00000613546 102 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms