Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 AC024224.1-201ENST00000538284 609 ntBASIC2.92□□□□□ -1.94
SMARCB1Q12824 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.92□□□□□ -1.94
SMARCB1Q12824 AC079600.2-201ENST00000550076 130 ntBASIC2.92□□□□□ -1.94
SMARCB1Q12824 AC087897.1-201ENST00000550134 156 ntBASIC2.92□□□□□ -1.94
SMARCB1Q12824 MIR3605-201ENST00000583214 100 ntBASIC2.92□□□□□ -1.94
SMARCB1Q12824 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.92□□□□□ -1.94
SMARCB1Q12824 AL035413.2-201ENST00000604801 525 ntBASIC2.92□□□□□ -1.94
SMARCB1Q12824 VN1R74P-201ENST00000613259 503 ntBASIC2.92□□□□□ -1.94
SMARCB1Q12824 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SMARCB1Q12824 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.92□□□□□ -1.94
SMARCB1Q12824 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.92□□□□□ -1.94
SMARCB1Q12824 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SMARCB1Q12824 RNU6-859P-201ENST00000362728 107 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
SMARCB1Q12824 RNU6-1257P-201ENST00000384625 110 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 MIR217-201ENST00000384817 110 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 AL355143.1-201ENST00000407101 841 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.91□□□□□ -1.94
SMARCB1Q12824 RNU6-1077P-201ENST00000410506 102 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 BTF3P8-201ENST00000414577 526 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 FCF1P2-201ENST00000415284 583 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 USP9YP21-201ENST00000420603 432 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 AC233981.1-201ENST00000423224 461 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.91□□□□□ -1.94
SMARCB1Q12824 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.91□□□□□ -1.94
SMARCB1Q12824 AC104073.1-201ENST00000451988 151 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 AL109933.2-201ENST00000452651 260 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 RPS24P6-201ENST00000452670 400 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 AC104472.2-201ENST00000469035 601 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 RN7SL432P-201ENST00000484057 298 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.91□□□□□ -1.94
SMARCB1Q12824 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.91□□□□□ -1.94
SMARCB1Q12824 SUMO2P5-201ENST00000506790 245 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.91□□□□□ -1.94
SMARCB1Q12824 AC027309.2-201ENST00000520566 192 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.91□□□□□ -1.94
SMARCB1Q12824 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.91□□□□□ -1.94
SMARCB1Q12824 AC087894.1-201ENST00000538359 518 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.91□□□□□ -1.94
SMARCB1Q12824 AADACP1-206ENST00000561502 1193 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 SNORD84-203ENST00000584275 78 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.91□□□□□ -1.94
SMARCB1Q12824 OR4G1P-201ENST00000588632 938 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 AP002802.2-201ENST00000605877 235 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.91□□□□□ -1.94
SMARCB1Q12824 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SMARCB1Q12824 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.91□□□□□ -1.94
SMARCB1Q12824 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 AP000676.4-201ENST00000624659 623 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 AP002907.1-201ENST00000606361 1430 ntBASIC2.91□□□□□ -1.94
SMARCB1Q12824 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.91□□□□□ -1.94
SMARCB1Q12824 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SMARCB1Q12824 TAB3P1-202ENST00000452645 1634 ntBASIC2.9□□□□□ -1.94
SMARCB1Q12824 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.9□□□□□ -1.94
SMARCB1Q12824 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
SMARCB1Q12824 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SMARCB1Q12824 RNU6-839P-201ENST00000363347 108 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 RNU6-374P-201ENST00000364146 108 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 RNU6-629P-201ENST00000384061 103 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 RNU6-1181P-201ENST00000384191 106 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 AL136133.1-201ENST00000413694 376 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 RPS7P9-201ENST00000414704 586 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 AL451074.5-201ENST00000415894 435 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 NPM1P13-201ENST00000452663 865 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 MTND3P3-201ENST00000505004 126 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.9□□□□□ -1.95
SMARCB1Q12824 MTCO3P44-201ENST00000510977 541 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 AC093752.1-206ENST00000511823 336 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.9□□□□□ -1.95
SMARCB1Q12824 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.9□□□□□ -1.95
SMARCB1Q12824 SNORA9.3-201ENST00000516383 129 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 snoZ278.1-201ENST00000517059 112 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 AC023632.1-201ENST00000518463 375 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.9□□□□□ -1.95
SMARCB1Q12824 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.9□□□□□ -1.95
SMARCB1Q12824 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.9□□□□□ -1.95
SMARCB1Q12824 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.9□□□□□ -1.95
SMARCB1Q12824 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.9□□□□□ -1.95
SMARCB1Q12824 AC012182.1-201ENST00000570133 895 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 AC022069.1-201ENST00000582910 658 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 DNAJC19P3-201ENST00000594491 331 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 VN1R90P-201ENST00000595717 726 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 AL390838.2-201ENST00000602394 274 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 AC068831.7-201ENST00000616954 363 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 AL355493.4-201ENST00000618530 292 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.9□□□□□ -1.95
SMARCB1Q12824 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.9□□□□□ -1.95
SMARCB1Q12824 MIR6733-201ENST00000635723 61 ntBASIC2.9□□□□□ -1.95
SMARCB1Q12824 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SMARCB1Q12824 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SMARCB1Q12824 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
SMARCB1Q12824 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
SMARCB1Q12824 MAPK10-322ENST00000641485 4530 ntBASIC2.89□□□□□ -1.95
SMARCB1Q12824 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SMARCB1Q12824 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.89□□□□□ -1.95
SMARCB1Q12824 RNU6-263P-201ENST00000363811 107 ntBASIC2.89□□□□□ -1.95
SMARCB1Q12824 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.89□□□□□ -1.95
SMARCB1Q12824 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
SMARCB1Q12824 DEFB109C-201ENST00000382575 264 ntBASIC2.89□□□□□ -1.95
SMARCB1Q12824 DEFB109B-201ENST00000382656 264 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms