Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC010468.1-201ENST00000461022 817 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 AL049830.2-201ENST00000480072 201 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 VN1R104P-201ENST00000505115 1009 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 AC005921.1-201ENST00000510589 286 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 SCGB1D5P-201ENST00000515134 247 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 AC026801.2-201ENST00000515352 425 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.44□□□□□ -1.86
GABPAQ06546 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.44□□□□□ -1.86
GABPAQ06546 AP004242.1-201ENST00000533701 349 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.44□□□□□ -1.86
GABPAQ06546 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.44□□□□□ -1.86
GABPAQ06546 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.44□□□□□ -1.86
GABPAQ06546 AC079600.2-201ENST00000550076 130 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 GTF3AP2-201ENST00000557014 266 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.44□□□□□ -1.86
GABPAQ06546 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.44□□□□□ -1.86
GABPAQ06546 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
GABPAQ06546 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.44□□□□□ -1.86
GABPAQ06546 CR381572.1-201ENST00000625098 102 ntBASIC3.44□□□□□ -1.86
GABPAQ06546 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.44□□□□□ -1.86
GABPAQ06546 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.44□□□□□ -1.86
GABPAQ06546 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
GABPAQ06546 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.43□□□□□ -1.86
GABPAQ06546 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
GABPAQ06546 RNU4-92P-201ENST00000363783 136 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 RNU6-335P-201ENST00000364563 113 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 Y_RNA.465-201ENST00000384293 102 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 RNU6-821P-201ENST00000390995 107 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 SSR1P2-201ENST00000415208 787 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 EI24P1-201ENST00000416584 867 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 MTND2P5-201ENST00000432656 1006 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 AC105272.1-201ENST00000438604 198 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.43□□□□□ -1.86
GABPAQ06546 SLC31A1P1-201ENST00000451221 567 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.43□□□□□ -1.86
GABPAQ06546 AC078918.1-201ENST00000498515 228 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.43□□□□□ -1.86
GABPAQ06546 SLC2A13P1-201ENST00000531560 322 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 AC024224.1-201ENST00000538284 609 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.43□□□□□ -1.86
GABPAQ06546 AC107016.2-201ENST00000547968 190 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 HIGD1AP17-201ENST00000554576 276 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.43□□□□□ -1.86
GABPAQ06546 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.43□□□□□ -1.86
GABPAQ06546 MIR5047-201ENST00000579212 100 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
GABPAQ06546 ELOCP29-201ENST00000588193 334 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 BNIP3P24-201ENST00000593398 557 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.43□□□□□ -1.86
GABPAQ06546 AC024153.1-201ENST00000603103 365 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 AC105148.1-201ENST00000604961 409 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 AP000240.1-201ENST00000609910 452 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.43□□□□□ -1.86
GABPAQ06546 AC018755.4-201ENST00000619715 454 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 AC090897.3-201ENST00000636973 1157 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
GABPAQ06546 AP001148.1-201ENST00000624124 2359 ntBASIC3.43□□□□□ -1.86
GABPAQ06546 AC093010.3-201ENST00000570269 15214 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
GABPAQ06546 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.42□□□□□ -1.86
GABPAQ06546 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
GABPAQ06546 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.42□□□□□ -1.86
GABPAQ06546 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
GABPAQ06546 SNORA5B-201ENST00000363786 132 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 SNORA9.2-201ENST00000365361 133 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 RNU6-1122P-201ENST00000384449 107 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
GABPAQ06546 U3.42-201ENST00000408746 214 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 RNA5SP274-201ENST00000410484 108 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 AC068533.2-201ENST00000411872 306 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.42□□□□□ -1.86
GABPAQ06546 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.42□□□□□ -1.86
GABPAQ06546 TOMM22P1-201ENST00000418578 312 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 RPL21P40-201ENST00000428586 483 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 RPL21P112-201ENST00000434403 463 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 TXNP1-201ENST00000441872 371 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.42□□□□□ -1.86
GABPAQ06546 AL162389.1-201ENST00000449233 177 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 UBE2DNL-203ENST00000474922 222 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 MTCO3P35-201ENST00000485582 781 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.42□□□□□ -1.86
GABPAQ06546 MTCYBP17-201ENST00000503579 789 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
GABPAQ06546 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.42□□□□□ -1.86
GABPAQ06546 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.42□□□□□ -1.86
GABPAQ06546 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.42□□□□□ -1.86
GABPAQ06546 AP004371.1-201ENST00000525240 214 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 MTCYBP41-201ENST00000528913 1123 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.42□□□□□ -1.86
GABPAQ06546 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.42□□□□□ -1.86
GABPAQ06546 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
GABPAQ06546 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.42□□□□□ -1.86
GABPAQ06546 ZNF192P1-203ENST00000565888 810 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.42□□□□□ -1.86
GABPAQ06546 MAGOH2P-202ENST00000584384 429 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 AC022146.1-201ENST00000595307 847 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.42□□□□□ -1.86
GABPAQ06546 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.42□□□□□ -1.86
GABPAQ06546 AL451074.6-201ENST00000608512 729 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 AC107075.1-201ENST00000613695 314 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms