Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC117490.2-201ENST00000610042 594 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 MIR7106-201ENST00000612419 65 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 AC135507.2-201ENST00000612443 309 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 AC025588.4-201ENST00000615802 908 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.88□□□□□ -2.11
HIST1H1AQ02539 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HIST1H1AQ02539 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HIST1H1AQ02539 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HIST1H1AQ02539 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HIST1H1AQ02539 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
HIST1H1AQ02539 AC123912.3-201ENST00000600907 1367 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 RNU1-105P-201ENST00000363470 161 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 RNA5SP456-201ENST00000364002 114 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 SNORA41-201ENST00000384675 132 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 MIR196B-201ENST00000384852 84 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HIST1H1AQ02539 RNU2-52P-201ENST00000410680 190 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.87□□□□□ -2.11
HIST1H1AQ02539 WARS2P1-201ENST00000429678 537 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 AP000936.2-201ENST00000447151 681 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 DPPA3P1-201ENST00000448050 469 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.87□□□□□ -2.11
HIST1H1AQ02539 RPL31P41-201ENST00000477967 372 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 AC108734.3-201ENST00000481241 1165 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 RPS3AP14-201ENST00000483907 780 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.87□□□□□ -2.11
HIST1H1AQ02539 RPS27P26-201ENST00000494583 239 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 NDUFB4P2-201ENST00000509515 391 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 AC006445.2-201ENST00000510061 472 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.87□□□□□ -2.11
HIST1H1AQ02539 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.87□□□□□ -2.11
HIST1H1AQ02539 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HIST1H1AQ02539 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.87□□□□□ -2.11
HIST1H1AQ02539 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.87□□□□□ -2.11
HIST1H1AQ02539 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.87□□□□□ -2.11
HIST1H1AQ02539 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.87□□□□□ -2.11
HIST1H1AQ02539 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.87□□□□□ -2.11
HIST1H1AQ02539 SNORD53-201ENST00000579969 78 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 OR2AS2P-201ENST00000606902 342 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 AL161629.2-201ENST00000615347 275 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 HMGB1P24-202ENST00000615653 685 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 AC009090.3-201ENST00000616553 565 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 U4.3-201ENST00000621047 82 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 AL049780.3-201ENST00000624612 1583 ntBASIC1.87□□□□□ -2.11
HIST1H1AQ02539 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.87□□□□□ -2.11
HIST1H1AQ02539 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.87□□□□□ -2.11
HIST1H1AQ02539 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 OR5J1P-201ENST00000313544 939 ntBASIC1.86□□□□□ -2.11
HIST1H1AQ02539 SNORA51.11-201ENST00000384442 131 ntBASIC1.86□□□□□ -2.11
HIST1H1AQ02539 RNA5SP354-201ENST00000391247 136 ntBASIC1.86□□□□□ -2.11
HIST1H1AQ02539 AL355497.1-201ENST00000406262 551 ntBASIC1.86□□□□□ -2.11
HIST1H1AQ02539 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 ARL2BPP3-201ENST00000421226 480 ntBASIC1.86□□□□□ -2.11
HIST1H1AQ02539 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 AL513328.1-201ENST00000446460 224 ntBASIC1.86□□□□□ -2.11
HIST1H1AQ02539 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 RNU7-26P-201ENST00000458980 63 ntBASIC1.86□□□□□ -2.11
HIST1H1AQ02539 AC107398.1-201ENST00000486904 505 ntBASIC1.86□□□□□ -2.11
HIST1H1AQ02539 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 MLLT10P2-201ENST00000506434 249 ntBASIC1.86□□□□□ -2.11
HIST1H1AQ02539 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 RN7SKP132-201ENST00000516001 208 ntBASIC1.86□□□□□ -2.11
HIST1H1AQ02539 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 AC092470.1-201ENST00000546187 132 ntBASIC1.86□□□□□ -2.11
HIST1H1AQ02539 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 MIR3117-201ENST00000584034 78 ntBASIC1.86□□□□□ -2.11
HIST1H1AQ02539 MIR3616-201ENST00000584070 92 ntBASIC1.86□□□□□ -2.11
HIST1H1AQ02539 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 AC010615.3-201ENST00000597319 394 ntBASIC1.86□□□□□ -2.11
HIST1H1AQ02539 AC079089.3-201ENST00000603094 673 ntBASIC1.86□□□□□ -2.11
HIST1H1AQ02539 AL513477.2-201ENST00000607858 568 ntBASIC1.86□□□□□ -2.11
HIST1H1AQ02539 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 AL354950.1-201ENST00000614150 568 ntBASIC1.86□□□□□ -2.11
HIST1H1AQ02539 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 CR848007.1-201ENST00000442354 1699 ntBASIC1.86□□□□□ -2.11
HIST1H1AQ02539 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.86□□□□□ -2.11
HIST1H1AQ02539 MTND4P8-201ENST00000514997 1362 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.85□□□□□ -2.11
HIST1H1AQ02539 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HIST1H1AQ02539 HMGB1P5-201ENST00000255320 642 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 SNORD114-30-201ENST00000364448 72 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.85□□□□□ -2.11
HIST1H1AQ02539 RNU6-761P-201ENST00000384148 107 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 RNU4-52P-201ENST00000384209 138 ntBASIC1.85□□□□□ -2.11
HIST1H1AQ02539 MIR34A-201ENST00000385130 110 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms