Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.7□□□□□ -1.82
PRAMEP78395 MIR6810-201ENST00000622701 70 ntBASIC3.7□□□□□ -1.82
PRAMEP78395 AL158801.5-201ENST00000623123 465 ntBASIC3.7□□□□□ -1.82
PRAMEP78395 AP000553.6-201ENST00000641242 118 ntBASIC3.7□□□□□ -1.82
PRAMEP78395 AC092125.1-201ENST00000562568 1995 ntBASIC3.7□□□□□ -1.82
PRAMEP78395 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
PRAMEP78395 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.7□□□□□ -1.82
PRAMEP78395 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.7□□□□□ -1.82
PRAMEP78395 PABPC1P9-201ENST00000426076 1612 ntBASIC3.7□□□□□ -1.82
PRAMEP78395 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.7□□□□□ -1.82
PRAMEP78395 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.7□□□□□ -1.82
PRAMEP78395 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRAMEP78395 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PRAMEP78395 AC006378.2-201ENST00000623178 2476 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRAMEP78395 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.69□□□□□ -1.82
PRAMEP78395 AL445523.1-201ENST00000451184 1362 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 Y_RNA.97-201ENST00000363094 102 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 RNU5F-7P-201ENST00000363696 115 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 RNU6-501P-201ENST00000364072 100 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PRAMEP78395 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PRAMEP78395 SNORD116-8-201ENST00000384365 95 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 U3.20-201ENST00000390909 217 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 RN7SKP156-201ENST00000410308 342 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 RPL7P8-201ENST00000411964 730 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.69□□□□□ -1.82
PRAMEP78395 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.69□□□□□ -1.82
PRAMEP78395 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.69□□□□□ -1.82
PRAMEP78395 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.69□□□□□ -1.82
PRAMEP78395 AL512649.1-201ENST00000428997 581 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 AL365184.2-201ENST00000431139 435 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 AC091390.1-201ENST00000433904 331 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.69□□□□□ -1.82
PRAMEP78395 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.69□□□□□ -1.82
PRAMEP78395 AC108734.1-201ENST00000439549 399 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PRAMEP78395 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.69□□□□□ -1.82
PRAMEP78395 AC103987.1-201ENST00000473394 348 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.69□□□□□ -1.82
PRAMEP78395 AF131216.2-201ENST00000512316 564 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 RNU6-798P-201ENST00000516912 103 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.69□□□□□ -1.82
PRAMEP78395 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.69□□□□□ -1.82
PRAMEP78395 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PRAMEP78395 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.69□□□□□ -1.82
PRAMEP78395 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.69□□□□□ -1.82
PRAMEP78395 AL121576.1-201ENST00000556055 276 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 HSPE1P5-201ENST00000561489 272 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 PCMTD1P2-201ENST00000565017 355 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.69□□□□□ -1.82
PRAMEP78395 AC008088.1-201ENST00000580993 280 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 MIR5187-201ENST00000583479 76 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 AC011468.4-201ENST00000603942 409 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.69□□□□□ -1.82
PRAMEP78395 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PRAMEP78395 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.69□□□□□ -1.82
PRAMEP78395 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.69□□□□□ -1.82
PRAMEP78395 AC127502.3-201ENST00000636170 1206 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 TAB3P1-202ENST00000452645 1634 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 CCT4P2-201ENST00000233836 1548 ntBASIC3.69□□□□□ -1.82
PRAMEP78395 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRAMEP78395 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.69□□□□□ -1.82
PRAMEP78395 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PRAMEP78395 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PRAMEP78395 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PRAMEP78395 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.68□□□□□ -1.82
PRAMEP78395 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.68□□□□□ -1.82
PRAMEP78395 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.68□□□□□ -1.82
PRAMEP78395 SOD2P1-201ENST00000396543 562 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 CCNG1P1-201ENST00000406783 885 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 SNORA57.3-201ENST00000411095 141 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.68□□□□□ -1.82
PRAMEP78395 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
PRAMEP78395 RPS27AP14-201ENST00000422868 454 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 ARF4P2-201ENST00000430209 526 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 NDUFB1P1-201ENST00000435191 180 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 RPL37P21-201ENST00000435890 276 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.68□□□□□ -1.82
PRAMEP78395 EPS15P1-201ENST00000448836 336 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 RPL36AP33-201ENST00000450395 310 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.68□□□□□ -1.82
PRAMEP78395 MTCO1P42-201ENST00000457379 726 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 UBDP1-202ENST00000457888 382 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 MTND3P7-201ENST00000474435 343 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.68□□□□□ -1.82
PRAMEP78395 VN1R104P-201ENST00000505115 1009 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.68□□□□□ -1.82
PRAMEP78395 NPM1P41-201ENST00000512920 831 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 MTCO1P47-201ENST00000523889 1271 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 AL133271.1-201ENST00000538229 291 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.68□□□□□ -1.82
PRAMEP78395 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
PRAMEP78395 BDH2P1-201ENST00000602288 736 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 AC106900.2-201ENST00000604994 317 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 MIR7844-201ENST00000616161 122 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 AC243312.2-201ENST00000623340 601 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 AC112204.3-201ENST00000623822 332 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 AC079597.1-201ENST00000624306 508 ntBASIC3.68□□□□□ -1.82
PRAMEP78395 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms