Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 AC133794.1-201ENST00000602731 914 ntBASIC3.12□□□□□ -1.91
CNTNAP1P78357 AC008277.2-201ENST00000605196 797 ntBASIC3.12□□□□□ -1.91
CNTNAP1P78357 AC073592.7-201ENST00000623659 507 ntBASIC3.12□□□□□ -1.91
CNTNAP1P78357 AC109315.1-201ENST00000584143 1347 ntBASIC3.12□□□□□ -1.91
CNTNAP1P78357 AL512283.1-201ENST00000606756 1384 ntBASIC3.12□□□□□ -1.91
CNTNAP1P78357 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CNTNAP1P78357 ZNF734P-201ENST00000419494 1534 ntBASIC3.12□□□□□ -1.91
CNTNAP1P78357 Y_RNA.796-201ENST00000364268 102 ntBASIC3.12□□□□□ -1.91
CNTNAP1P78357 Y_RNA.799-201ENST00000364992 102 ntBASIC3.12□□□□□ -1.91
CNTNAP1P78357 Y_RNA.355-201ENST00000365462 98 ntBASIC3.12□□□□□ -1.91
CNTNAP1P78357 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CNTNAP1P78357 MTND2P16-201ENST00000419987 799 ntBASIC3.12□□□□□ -1.91
CNTNAP1P78357 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.12□□□□□ -1.91
CNTNAP1P78357 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.12□□□□□ -1.91
CNTNAP1P78357 AL590762.3-201ENST00000436372 640 ntBASIC3.12□□□□□ -1.91
CNTNAP1P78357 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.12□□□□□ -1.91
CNTNAP1P78357 SYPL1P1-201ENST00000473622 768 ntBASIC3.12□□□□□ -1.91
CNTNAP1P78357 HMGB1P38-201ENST00000490557 577 ntBASIC3.12□□□□□ -1.91
CNTNAP1P78357 MTND2P31-201ENST00000512602 616 ntBASIC3.12□□□□□ -1.91
CNTNAP1P78357 MTCYBP41-201ENST00000528913 1123 ntBASIC3.12□□□□□ -1.91
CNTNAP1P78357 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.12□□□□□ -1.91
CNTNAP1P78357 AC092470.1-201ENST00000546187 132 ntBASIC3.12□□□□□ -1.91
CNTNAP1P78357 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.12□□□□□ -1.91
CNTNAP1P78357 RN7SL622P-201ENST00000585292 275 ntBASIC3.12□□□□□ -1.91
CNTNAP1P78357 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.12□□□□□ -1.91
CNTNAP1P78357 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.12□□□□□ -1.91
CNTNAP1P78357 AP002906.1-201ENST00000603405 233 ntBASIC3.12□□□□□ -1.91
CNTNAP1P78357 AC104237.2-201ENST00000612456 443 ntBASIC3.12□□□□□ -1.91
CNTNAP1P78357 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CNTNAP1P78357 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CNTNAP1P78357 AC002543.1-201ENST00000299783 1954 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.11□□□□□ -1.91
CNTNAP1P78357 SNORD62.1-201ENST00000362541 86 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 Y_RNA.140-201ENST00000363474 103 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 SNORA51.2-201ENST00000364595 132 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CNTNAP1P78357 RNU6-441P-201ENST00000384545 106 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 RNU6-932P-201ENST00000391108 106 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CNTNAP1P78357 PTGES3P2-201ENST00000407942 482 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 Y_RNA.595-201ENST00000410403 105 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.11□□□□□ -1.91
CNTNAP1P78357 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.11□□□□□ -1.91
CNTNAP1P78357 MTATP6P11-201ENST00000428071 670 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 AC114973.1-201ENST00000429057 632 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.11□□□□□ -1.91
CNTNAP1P78357 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.11□□□□□ -1.91
CNTNAP1P78357 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CNTNAP1P78357 RPL32P14-201ENST00000463196 378 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 SNRPGP3-201ENST00000469405 227 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 AP004217.1-201ENST00000480579 346 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.11□□□□□ -1.91
CNTNAP1P78357 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.11□□□□□ -1.91
CNTNAP1P78357 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.11□□□□□ -1.91
CNTNAP1P78357 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.11□□□□□ -1.91
CNTNAP1P78357 OR4A45P-201ENST00000529954 901 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.11□□□□□ -1.91
CNTNAP1P78357 AC018630.1-201ENST00000541376 925 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.11□□□□□ -1.91
CNTNAP1P78357 AC107954.1-201ENST00000565906 727 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 MIR4506-201ENST00000584693 77 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 MIR4781-201ENST00000585250 76 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CNTNAP1P78357 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CNTNAP1P78357 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.11□□□□□ -1.91
CNTNAP1P78357 AC048347.1-201ENST00000624621 427 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 AL356094.1-201ENST00000624663 1212 ntBASIC3.11□□□□□ -1.91
CNTNAP1P78357 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.11□□□□□ -1.91
CNTNAP1P78357 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.11□□□□□ -1.91
CNTNAP1P78357 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CNTNAP1P78357 SGO1P1-201ENST00000603525 1447 ntBASIC3.1□□□□□ -1.91
CNTNAP1P78357 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CNTNAP1P78357 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CNTNAP1P78357 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.1□□□□□ -1.91
CNTNAP1P78357 AF127577.6-201ENST00000623352 2191 ntBASIC3.1□□□□□ -1.91
CNTNAP1P78357 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CNTNAP1P78357 MIR16-1-201ENST00000385271 89 ntBASIC3.1□□□□□ -1.91
CNTNAP1P78357 AL121972.1-201ENST00000402023 252 ntBASIC3.1□□□□□ -1.91
CNTNAP1P78357 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.1□□□□□ -1.91
CNTNAP1P78357 MORF4L1P6-201ENST00000418771 268 ntBASIC3.1□□□□□ -1.91
CNTNAP1P78357 AC009237.2-201ENST00000421358 284 ntBASIC3.1□□□□□ -1.91
CNTNAP1P78357 RPP40P1-201ENST00000426762 456 ntBASIC3.1□□□□□ -1.91
CNTNAP1P78357 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.1□□□□□ -1.91
CNTNAP1P78357 MOB1AP2-201ENST00000446060 614 ntBASIC3.1□□□□□ -1.91
CNTNAP1P78357 AL050341.1-201ENST00000447743 313 ntBASIC3.1□□□□□ -1.91
CNTNAP1P78357 AC245517.4-201ENST00000448601 281 ntBASIC3.1□□□□□ -1.91
CNTNAP1P78357 AC118282.1-201ENST00000506408 765 ntBASIC3.1□□□□□ -1.91
CNTNAP1P78357 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.1□□□□□ -1.91
CNTNAP1P78357 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.1□□□□□ -1.91
CNTNAP1P78357 AC119751.1-201ENST00000513357 765 ntBASIC3.1□□□□□ -1.91
CNTNAP1P78357 RNA5SP385-201ENST00000515947 110 ntBASIC3.1□□□□□ -1.91
CNTNAP1P78357 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.1□□□□□ -1.91
CNTNAP1P78357 AP003168.1-201ENST00000530091 307 ntBASIC3.1□□□□□ -1.91
CNTNAP1P78357 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.1□□□□□ -1.91
CNTNAP1P78357 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.1□□□□□ -1.91
CNTNAP1P78357 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.1□□□□□ -1.91
CNTNAP1P78357 AC074051.3-201ENST00000570238 358 ntBASIC3.1□□□□□ -1.91
CNTNAP1P78357 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms