Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.11□□□□□ -2.23
RPL39P62891 AP002770.2-201ENST00000543613 532 ntBASIC1.11□□□□□ -2.23
RPL39P62891 NBEAP1-201ENST00000554452 979 ntBASIC1.11□□□□□ -2.23
RPL39P62891 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC1.11□□□□□ -2.23
RPL39P62891 AC103710.2-201ENST00000609912 942 ntBASIC1.11□□□□□ -2.23
RPL39P62891 MIR8081-201ENST00000611533 95 ntBASIC1.11□□□□□ -2.23
RPL39P62891 AC064859.1-201ENST00000624741 174 ntBASIC1.11□□□□□ -2.23
RPL39P62891 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.11□□□□□ -2.23
RPL39P62891 ZNF876P-202ENST00000398732 1485 ntBASIC1.11□□□□□ -2.23
RPL39P62891 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.11□□□□□ -2.23
RPL39P62891 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
RPL39P62891 AC130650.2-201ENST00000618736 2403 ntBASIC1.1□□□□□ -2.23
RPL39P62891 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
RPL39P62891 MTND5P10-201ENST00000603719 1809 ntBASIC1.1□□□□□ -2.23
RPL39P62891 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
RPL39P62891 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
RPL39P62891 UBE2L2-201ENST00000254302 429 ntBASIC1.1□□□□□ -2.23
RPL39P62891 RNU6-618P-201ENST00000363518 112 ntBASIC1.1□□□□□ -2.23
RPL39P62891 RNU6-997P-201ENST00000384725 107 ntBASIC1.1□□□□□ -2.23
RPL39P62891 OR4K11P-201ENST00000431829 904 ntBASIC1.1□□□□□ -2.23
RPL39P62891 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.1□□□□□ -2.23
RPL39P62891 RPL7P54-201ENST00000438336 674 ntBASIC1.1□□□□□ -2.23
RPL39P62891 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.1□□□□□ -2.23
RPL39P62891 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
RPL39P62891 USP9YP10-201ENST00000454868 628 ntBASIC1.1□□□□□ -2.23
RPL39P62891 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.1□□□□□ -2.23
RPL39P62891 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.1□□□□□ -2.23
RPL39P62891 KLRA1P-201ENST00000503499 986 ntBASIC1.1□□□□□ -2.23
RPL39P62891 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.1□□□□□ -2.23
RPL39P62891 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.1□□□□□ -2.23
RPL39P62891 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.1□□□□□ -2.23
RPL39P62891 AC008549.1-201ENST00000512900 643 ntBASIC1.1□□□□□ -2.23
RPL39P62891 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.1□□□□□ -2.23
RPL39P62891 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.1□□□□□ -2.23
RPL39P62891 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.1□□□□□ -2.23
RPL39P62891 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.1□□□□□ -2.23
RPL39P62891 AP003117.1-201ENST00000602771 554 ntBASIC1.1□□□□□ -2.23
RPL39P62891 AC093673.2-201ENST00000609674 331 ntBASIC1.1□□□□□ -2.23
RPL39P62891 AL162373.1-201ENST00000620433 407 ntBASIC1.1□□□□□ -2.23
RPL39P62891 AC016542.2-201ENST00000624201 619 ntBASIC1.1□□□□□ -2.23
RPL39P62891 AC098679.5-201ENST00000624394 571 ntBASIC1.1□□□□□ -2.23
RPL39P62891 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
RPL39P62891 AC022031.1-201ENST00000585985 2593 ntBASIC1.1□□□□□ -2.23
RPL39P62891 AP006437.1-201ENST00000641440 3685 ntBASIC1.1□□□□□ -2.23
RPL39P62891 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
RPL39P62891 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
RPL39P62891 Z98749.2-208ENST00000381646 500 ntBASIC1.09□□□□□ -2.23
RPL39P62891 RPS3AP26-201ENST00000398259 784 ntBASIC1.09□□□□□ -2.23
RPL39P62891 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
RPL39P62891 BTF3P9-201ENST00000418784 283 ntBASIC1.09□□□□□ -2.23
RPL39P62891 HMGB3P17-201ENST00000504195 649 ntBASIC1.09□□□□□ -2.23
RPL39P62891 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.09□□□□□ -2.23
RPL39P62891 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
RPL39P62891 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.09□□□□□ -2.23
RPL39P62891 RNA5SP182-201ENST00000516064 82 ntBASIC1.09□□□□□ -2.23
RPL39P62891 RN7SKP244-201ENST00000516513 307 ntBASIC1.09□□□□□ -2.23
RPL39P62891 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.09□□□□□ -2.23
RPL39P62891 AC021733.2-201ENST00000518830 497 ntBASIC1.09□□□□□ -2.23
RPL39P62891 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.09□□□□□ -2.23
RPL39P62891 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.09□□□□□ -2.23
RPL39P62891 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.09□□□□□ -2.23
RPL39P62891 MIR4672-201ENST00000583126 81 ntBASIC1.09□□□□□ -2.23
RPL39P62891 AC020895.1-201ENST00000595362 272 ntBASIC1.09□□□□□ -2.23
RPL39P62891 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.09□□□□□ -2.23
RPL39P62891 AC009318.3-201ENST00000616916 503 ntBASIC1.09□□□□□ -2.23
RPL39P62891 AL590808.1-201ENST00000618696 141 ntBASIC1.09□□□□□ -2.23
RPL39P62891 AC091932.3-201ENST00000624223 323 ntBASIC1.09□□□□□ -2.23
RPL39P62891 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.09□□□□□ -2.23
RPL39P62891 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.09□□□□□ -2.23
RPL39P62891 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.09□□□□□ -2.24
RPL39P62891 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.09□□□□□ -2.24
RPL39P62891 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
RPL39P62891 CD24P4-201ENST00000382840 243 ntBASIC1.08□□□□□ -2.24
RPL39P62891 MIR583-201ENST00000384846 75 ntBASIC1.08□□□□□ -2.24
RPL39P62891 AL023807.1-201ENST00000407932 359 ntBASIC1.08□□□□□ -2.24
RPL39P62891 PTGES3P2-201ENST00000407942 482 ntBASIC1.08□□□□□ -2.24
RPL39P62891 MIR1304-201ENST00000408243 91 ntBASIC1.08□□□□□ -2.24
RPL39P62891 AL445183.3-201ENST00000414168 502 ntBASIC1.08□□□□□ -2.24
RPL39P62891 HMGN2P30-201ENST00000423237 256 ntBASIC1.08□□□□□ -2.24
RPL39P62891 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.08□□□□□ -2.24
RPL39P62891 UBE2D3P1-201ENST00000436669 444 ntBASIC1.08□□□□□ -2.24
RPL39P62891 ELOCP10-201ENST00000440624 327 ntBASIC1.08□□□□□ -2.24
RPL39P62891 RPS26P56-201ENST00000444468 240 ntBASIC1.08□□□□□ -2.24
RPL39P62891 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.08□□□□□ -2.24
RPL39P62891 CLIC4P1-201ENST00000453177 535 ntBASIC1.08□□□□□ -2.24
RPL39P62891 AC072039.1-201ENST00000477611 581 ntBASIC1.08□□□□□ -2.24
RPL39P62891 FO393415.2-201ENST00000480085 343 ntBASIC1.08□□□□□ -2.24
RPL39P62891 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.08□□□□□ -2.24
RPL39P62891 RAC1P5-201ENST00000512182 576 ntBASIC1.08□□□□□ -2.24
RPL39P62891 Y_RNA.675-201ENST00000516389 149 ntBASIC1.08□□□□□ -2.24
RPL39P62891 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.08□□□□□ -2.24
RPL39P62891 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.08□□□□□ -2.24
RPL39P62891 AC090312.2-201ENST00000582687 378 ntBASIC1.08□□□□□ -2.24
RPL39P62891 MIR4512-201ENST00000583257 77 ntBASIC1.08□□□□□ -2.24
RPL39P62891 SNORD84-203ENST00000584275 78 ntBASIC1.08□□□□□ -2.24
RPL39P62891 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.08□□□□□ -2.24
RPL39P62891 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.08□□□□□ -2.24
RPL39P62891 ELOCP34-201ENST00000604436 327 ntBASIC1.08□□□□□ -2.24
RPL39P62891 AL133507.1-201ENST00000605269 557 ntBASIC1.08□□□□□ -2.24
RPL39P62891 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms