Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.72□□□□□ -1.97
VSX2P58304 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.71□□□□□ -1.98
VSX2P58304 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.71□□□□□ -1.98
VSX2P58304 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
VSX2P58304 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
VSX2P58304 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
VSX2P58304 RNU1-35P-201ENST00000362782 153 ntBASIC2.71□□□□□ -1.98
VSX2P58304 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.71□□□□□ -1.98
VSX2P58304 MIR1289-1-201ENST00000408836 144 ntBASIC2.71□□□□□ -1.98
VSX2P58304 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.71□□□□□ -1.98
VSX2P58304 AL133384.1-201ENST00000412744 351 ntBASIC2.71□□□□□ -1.98
VSX2P58304 AC109780.2-201ENST00000413467 845 ntBASIC2.71□□□□□ -1.98
VSX2P58304 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.71□□□□□ -1.98
VSX2P58304 AL645937.1-202ENST00000421799 937 ntBASIC2.71□□□□□ -1.98
VSX2P58304 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.71□□□□□ -1.98
VSX2P58304 AC109583.1-201ENST00000432156 268 ntBASIC2.71□□□□□ -1.98
VSX2P58304 AC087499.2-201ENST00000432861 149 ntBASIC2.71□□□□□ -1.98
VSX2P58304 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
VSX2P58304 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.71□□□□□ -1.98
VSX2P58304 AC241584.1-201ENST00000438469 1241 ntBASIC2.71□□□□□ -1.98
VSX2P58304 AC093156.1-201ENST00000440382 670 ntBASIC2.71□□□□□ -1.98
VSX2P58304 RPS24P13-201ENST00000442520 397 ntBASIC2.71□□□□□ -1.98
VSX2P58304 AL034418.1-201ENST00000448675 860 ntBASIC2.71□□□□□ -1.98
VSX2P58304 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.71□□□□□ -1.98
VSX2P58304 snoU13.4-201ENST00000458916 104 ntBASIC2.71□□□□□ -1.98
VSX2P58304 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.71□□□□□ -1.98
VSX2P58304 RNU1-61P-201ENST00000516107 151 ntBASIC2.71□□□□□ -1.98
VSX2P58304 RNU6-27P-201ENST00000516146 107 ntBASIC2.71□□□□□ -1.98
VSX2P58304 AC024224.1-201ENST00000538284 609 ntBASIC2.71□□□□□ -1.98
VSX2P58304 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.71□□□□□ -1.98
VSX2P58304 AC012182.1-201ENST00000570133 895 ntBASIC2.71□□□□□ -1.98
VSX2P58304 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
VSX2P58304 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.71□□□□□ -1.98
VSX2P58304 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.71□□□□□ -1.98
VSX2P58304 AL355812.1-201ENST00000603215 216 ntBASIC2.71□□□□□ -1.98
VSX2P58304 AC092954.1-201ENST00000609121 445 ntBASIC2.71□□□□□ -1.98
VSX2P58304 AC091046.2-201ENST00000620775 665 ntBASIC2.71□□□□□ -1.98
VSX2P58304 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.71□□□□□ -1.98
VSX2P58304 LRRC77P-213ENST00000637727 880 ntBASIC2.71□□□□□ -1.98
VSX2P58304 AC244517.1-201ENST00000606030 2086 ntBASIC2.71□□□□□ -1.98
VSX2P58304 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
VSX2P58304 NUP58P1-201ENST00000502546 1738 ntBASIC2.71□□□□□ -1.98
VSX2P58304 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.7□□□□□ -1.98
VSX2P58304 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.7□□□□□ -1.98
VSX2P58304 SNORA5B-201ENST00000363786 132 ntBASIC2.7□□□□□ -1.98
VSX2P58304 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.7□□□□□ -1.98
VSX2P58304 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
VSX2P58304 MIR512-1-201ENST00000384913 84 ntBASIC2.7□□□□□ -1.98
VSX2P58304 RPS3AP26-201ENST00000398259 784 ntBASIC2.7□□□□□ -1.98
VSX2P58304 AL592148.1-201ENST00000413568 445 ntBASIC2.7□□□□□ -1.98
VSX2P58304 BTF3P8-201ENST00000414577 526 ntBASIC2.7□□□□□ -1.98
VSX2P58304 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.7□□□□□ -1.98
VSX2P58304 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
VSX2P58304 USP9YP36-201ENST00000424581 829 ntBASIC2.7□□□□□ -1.98
VSX2P58304 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.7□□□□□ -1.98
VSX2P58304 C1DP1-201ENST00000426049 402 ntBASIC2.7□□□□□ -1.98
VSX2P58304 AP000949.1-201ENST00000438328 629 ntBASIC2.7□□□□□ -1.98
VSX2P58304 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.7□□□□□ -1.98
VSX2P58304 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.7□□□□□ -1.98
VSX2P58304 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.7□□□□□ -1.98
VSX2P58304 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.7□□□□□ -1.98
VSX2P58304 AC091826.1-201ENST00000514065 313 ntBASIC2.7□□□□□ -1.98
VSX2P58304 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.7□□□□□ -1.98
VSX2P58304 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.7□□□□□ -1.98
VSX2P58304 ARL2BPP5-201ENST00000523141 481 ntBASIC2.7□□□□□ -1.98
VSX2P58304 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.7□□□□□ -1.98
VSX2P58304 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.7□□□□□ -1.98
VSX2P58304 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.7□□□□□ -1.98
VSX2P58304 SULT1C2P1-202ENST00000562418 459 ntBASIC2.7□□□□□ -1.98
VSX2P58304 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.7□□□□□ -1.98
VSX2P58304 MIR4513-201ENST00000581077 86 ntBASIC2.7□□□□□ -1.98
VSX2P58304 AC073387.2-201ENST00000604797 784 ntBASIC2.7□□□□□ -1.98
VSX2P58304 AC099785.1-201ENST00000605697 437 ntBASIC2.7□□□□□ -1.98
VSX2P58304 AL110115.1-201ENST00000614396 364 ntBASIC2.7□□□□□ -1.98
VSX2P58304 AC006111.3-201ENST00000622137 383 ntBASIC2.7□□□□□ -1.98
VSX2P58304 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.7□□□□□ -1.98
VSX2P58304 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
VSX2P58304 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.69□□□□□ -1.98
VSX2P58304 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
VSX2P58304 RNU6-492P-201ENST00000363035 104 ntBASIC2.69□□□□□ -1.98
VSX2P58304 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.69□□□□□ -1.98
VSX2P58304 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.69□□□□□ -1.98
VSX2P58304 RNU6-1077P-201ENST00000410506 102 ntBASIC2.69□□□□□ -1.98
VSX2P58304 LUZP4P1-201ENST00000415420 344 ntBASIC2.69□□□□□ -1.98
VSX2P58304 SSXP9-201ENST00000417503 292 ntBASIC2.69□□□□□ -1.98
VSX2P58304 MTCO3P1-205ENST00000422088 832 ntBASIC2.69□□□□□ -1.98
VSX2P58304 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.69□□□□□ -1.98
VSX2P58304 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.69□□□□□ -1.98
VSX2P58304 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.69□□□□□ -1.98
VSX2P58304 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.69□□□□□ -1.98
VSX2P58304 AC093155.1-201ENST00000440164 826 ntBASIC2.69□□□□□ -1.98
VSX2P58304 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.69□□□□□ -1.98
VSX2P58304 UBE2DNL-203ENST00000474922 222 ntBASIC2.69□□□□□ -1.98
VSX2P58304 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VSX2P58304 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VSX2P58304 AP001025.2-201ENST00000490908 477 ntBASIC2.69□□□□□ -1.98
VSX2P58304 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.69□□□□□ -1.98
VSX2P58304 AC069306.1-201ENST00000507006 843 ntBASIC2.69□□□□□ -1.98
VSX2P58304 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.69□□□□□ -1.98
VSX2P58304 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms