Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.89□□□□□ -1.95
PKNOX1P55347 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.89□□□□□ -1.95
PKNOX1P55347 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.89□□□□□ -1.95
PKNOX1P55347 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.89□□□□□ -1.95
PKNOX1P55347 AL031985.2-201ENST00000600955 480 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 AP001330.4-201ENST00000604350 154 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 AC069234.5-201ENST00000611056 416 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 AC131902.3-201ENST00000611767 581 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 AL020991.1-201ENST00000612314 373 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 AC107871.2-201ENST00000612894 502 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 MIR7112-201ENST00000616126 65 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 AL121895.2-201ENST00000619558 447 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 OR1S1-201ENST00000624470 978 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.89□□□□□ -1.95
PKNOX1P55347 MIR1322-201ENST00000638013 71 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PKNOX1P55347 AL355596.1-201ENST00000565399 3996 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
PKNOX1P55347 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PKNOX1P55347 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PKNOX1P55347 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PKNOX1P55347 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.88□□□□□ -1.95
PKNOX1P55347 MRPS36P1-201ENST00000421291 307 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.88□□□□□ -1.95
PKNOX1P55347 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.88□□□□□ -1.95
PKNOX1P55347 AC092427.1-201ENST00000439177 601 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 AC140076.1-201ENST00000449897 361 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 AC005297.2-201ENST00000450430 606 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.88□□□□□ -1.95
PKNOX1P55347 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.88□□□□□ -1.95
PKNOX1P55347 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.88□□□□□ -1.95
PKNOX1P55347 AC108734.3-201ENST00000481241 1165 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 AC068724.1-201ENST00000487100 792 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 AP002812.1-201ENST00000495378 474 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 MTND3P3-201ENST00000505004 126 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.88□□□□□ -1.95
PKNOX1P55347 KLHL2P1-201ENST00000508691 521 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 SNORA31.8-201ENST00000516327 108 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 RN7SKP272-201ENST00000516988 232 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 RNU6-711P-201ENST00000517255 106 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.88□□□□□ -1.95
PKNOX1P55347 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PKNOX1P55347 OR5AK1P-201ENST00000524837 922 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 OR5G4P-201ENST00000525251 760 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.88□□□□□ -1.95
PKNOX1P55347 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.88□□□□□ -1.95
PKNOX1P55347 CCNG2P1-201ENST00000549521 1000 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.88□□□□□ -1.95
PKNOX1P55347 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.88□□□□□ -1.95
PKNOX1P55347 FAM60BP-201ENST00000578364 658 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.88□□□□□ -1.95
PKNOX1P55347 AC069304.2-201ENST00000605154 435 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 AC068831.7-201ENST00000616954 363 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 AC010338.1-201ENST00000621823 717 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 AC095031.1-201ENST00000623685 672 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PKNOX1P55347 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PKNOX1P55347 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PKNOX1P55347 MAPK10-322ENST00000641485 4530 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.88□□□□□ -1.95
PKNOX1P55347 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PKNOX1P55347 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
PKNOX1P55347 AC090740.1-201ENST00000623193 2262 ntBASIC2.88□□□□□ -1.95
PKNOX1P55347 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.87□□□□□ -1.95
PKNOX1P55347 AP002907.1-201ENST00000606361 1430 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PKNOX1P55347 RPL9P7-201ENST00000330965 580 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PKNOX1P55347 RNU6-1155P-201ENST00000363554 107 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 RNA5SP267-201ENST00000364893 126 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 MIR122-201ENST00000385044 85 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 AL590004.2-201ENST00000404787 371 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 U3.42-201ENST00000408746 214 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.87□□□□□ -1.95
PKNOX1P55347 RN7SKP220-201ENST00000410611 288 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 RNA5SP120-201ENST00000410900 112 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 RPL7P10-201ENST00000417407 739 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 MTCO1P39-201ENST00000426148 480 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 MTND2P5-201ENST00000432656 1006 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
PKNOX1P55347 AL645638.1-201ENST00000440519 361 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.87□□□□□ -1.95
PKNOX1P55347 MTCO1P53-201ENST00000441633 699 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 AL591503.2-201ENST00000442314 1005 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 RPL36AP33-201ENST00000450395 310 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PKNOX1P55347 AC117440.1-201ENST00000474107 571 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PKNOX1P55347 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.87□□□□□ -1.95
PKNOX1P55347 TMEM251P1-201ENST00000503717 318 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 AC113347.3-201ENST00000509113 148 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 AC010625.1-201ENST00000511296 403 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.87□□□□□ -1.95
PKNOX1P55347 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.87□□□□□ -1.95
PKNOX1P55347 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.87□□□□□ -1.95
PKNOX1P55347 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.87□□□□□ -1.95
PKNOX1P55347 SETP7-201ENST00000552169 453 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.87□□□□□ -1.95
PKNOX1P55347 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms