Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RPF2P2-201ENST00000504693 896 ntBASIC3.49□□□□□ -1.85
CDH13P55290 AC105914.1-201ENST00000511798 226 ntBASIC3.49□□□□□ -1.85
CDH13P55290 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH13P55290 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDH13P55290 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH13P55290 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH13P55290 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.49□□□□□ -1.85
CDH13P55290 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH13P55290 AC013828.2-201ENST00000532487 235 ntBASIC3.49□□□□□ -1.85
CDH13P55290 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH13P55290 AC090888.1-201ENST00000561335 1141 ntBASIC3.49□□□□□ -1.85
CDH13P55290 AC135628.1-201ENST00000568867 534 ntBASIC3.49□□□□□ -1.85
CDH13P55290 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH13P55290 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH13P55290 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH13P55290 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.49□□□□□ -1.85
CDH13P55290 AC107214.2-201ENST00000608204 634 ntBASIC3.49□□□□□ -1.85
CDH13P55290 AC106028.5-201ENST00000610332 395 ntBASIC3.49□□□□□ -1.85
CDH13P55290 AP000676.3-201ENST00000623299 569 ntBASIC3.49□□□□□ -1.85
CDH13P55290 AC119674.1-207ENST00000641355 633 ntBASIC3.49□□□□□ -1.85
CDH13P55290 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH13P55290 AC009902.3-201ENST00000606235 2172 ntBASIC3.49□□□□□ -1.85
CDH13P55290 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH13P55290 RIOK3P1-201ENST00000418778 1528 ntBASIC3.49□□□□□ -1.85
CDH13P55290 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH13P55290 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDH13P55290 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CDH13P55290 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH13P55290 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH13P55290 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH13P55290 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH13P55290 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CDH13P55290 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH13P55290 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH13P55290 RNU6-1078P-201ENST00000364522 103 ntBASIC3.48□□□□□ -1.85
CDH13P55290 RNU6-660P-201ENST00000364566 109 ntBASIC3.48□□□□□ -1.85
CDH13P55290 DEFB109C-201ENST00000382575 264 ntBASIC3.48□□□□□ -1.85
CDH13P55290 DEFB109B-201ENST00000382656 264 ntBASIC3.48□□□□□ -1.85
CDH13P55290 AL590704.1-201ENST00000402856 794 ntBASIC3.48□□□□□ -1.85
CDH13P55290 U3.39-201ENST00000408569 239 ntBASIC3.48□□□□□ -1.85
CDH13P55290 TPMTP3-201ENST00000411928 735 ntBASIC3.48□□□□□ -1.85
CDH13P55290 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH13P55290 SSXP9-201ENST00000417503 292 ntBASIC3.48□□□□□ -1.85
CDH13P55290 MTND2P18-201ENST00000419962 1030 ntBASIC3.48□□□□□ -1.85
CDH13P55290 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH13P55290 Z99497.1-201ENST00000421282 135 ntBASIC3.48□□□□□ -1.85
CDH13P55290 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH13P55290 AC004975.1-201ENST00000428733 208 ntBASIC3.48□□□□□ -1.85
CDH13P55290 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH13P55290 RAC1P7-201ENST00000445367 377 ntBASIC3.48□□□□□ -1.85
CDH13P55290 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.48□□□□□ -1.85
CDH13P55290 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH13P55290 AC103987.1-201ENST00000473394 348 ntBASIC3.48□□□□□ -1.85
CDH13P55290 AC111000.2-201ENST00000507775 550 ntBASIC3.48□□□□□ -1.85
CDH13P55290 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH13P55290 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH13P55290 RNU6-579P-201ENST00000516879 102 ntBASIC3.48□□□□□ -1.85
CDH13P55290 NDUFB9P3-201ENST00000521269 501 ntBASIC3.48□□□□□ -1.85
CDH13P55290 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH13P55290 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH13P55290 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.48□□□□□ -1.85
CDH13P55290 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.48□□□□□ -1.85
CDH13P55290 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.48□□□□□ -1.85
CDH13P55290 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH13P55290 PCMTD1P2-201ENST00000565017 355 ntBASIC3.48□□□□□ -1.85
CDH13P55290 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH13P55290 MIR5047-201ENST00000579212 100 ntBASIC3.48□□□□□ -1.85
CDH13P55290 AP001429.1-201ENST00000602568 530 ntBASIC3.48□□□□□ -1.85
CDH13P55290 MTCYBP22-201ENST00000603788 447 ntBASIC3.48□□□□□ -1.85
CDH13P55290 AL158211.4-201ENST00000606988 584 ntBASIC3.48□□□□□ -1.85
CDH13P55290 AC022149.2-201ENST00000621061 203 ntBASIC3.48□□□□□ -1.85
CDH13P55290 AC009268.2-201ENST00000621925 457 ntBASIC3.48□□□□□ -1.85
CDH13P55290 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH13P55290 OR8B1P-202ENST00000641132 1178 ntBASIC3.48□□□□□ -1.85
CDH13P55290 AC009812.4-201ENST00000569134 1805 ntBASIC3.48□□□□□ -1.85
CDH13P55290 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH13P55290 MTND4P16-201ENST00000466108 1367 ntBASIC3.48□□□□□ -1.85
CDH13P55290 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH13P55290 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CDH13P55290 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CDH13P55290 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDH13P55290 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDH13P55290 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDH13P55290 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.47□□□□□ -1.85
CDH13P55290 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDH13P55290 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDH13P55290 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CDH13P55290 Y_RNA.169-201ENST00000363745 96 ntBASIC3.47□□□□□ -1.85
CDH13P55290 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.47□□□□□ -1.85
CDH13P55290 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.47□□□□□ -1.85
CDH13P55290 RNY3P9-201ENST00000384727 106 ntBASIC3.47□□□□□ -1.85
CDH13P55290 RNU4-65P-201ENST00000410473 140 ntBASIC3.47□□□□□ -1.85
CDH13P55290 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH13P55290 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.47□□□□□ -1.85
CDH13P55290 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH13P55290 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.47□□□□□ -1.85
CDH13P55290 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.47□□□□□ -1.85
CDH13P55290 FAM103A2P-201ENST00000444122 354 ntBASIC3.47□□□□□ -1.85
CDH13P55290 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH13P55290 AC097262.1-201ENST00000452559 548 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms