Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC007967.1-201ENST00000455422 1159 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.88□□□□□ -1.79
NR1H2P55055 UQCRHP4-201ENST00000471686 272 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 AP000797.1-201ENST00000478870 387 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 RPL7P24-201ENST00000493052 752 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 RN7SL812P-201ENST00000493791 279 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 AC004069.2-201ENST00000505438 1114 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 AC091435.1-201ENST00000505442 584 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.88□□□□□ -1.79
NR1H2P55055 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.88□□□□□ -1.79
NR1H2P55055 AF131216.2-201ENST00000512316 564 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 AC116347.2-201ENST00000514912 523 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.88□□□□□ -1.79
NR1H2P55055 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.88□□□□□ -1.79
NR1H2P55055 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NR1H2P55055 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.88□□□□□ -1.79
NR1H2P55055 SYF2P1-201ENST00000550658 413 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.88□□□□□ -1.79
NR1H2P55055 AC055876.1-202ENST00000567053 138 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 AC006362.1-201ENST00000567392 174 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.88□□□□□ -1.79
NR1H2P55055 AC103987.3-201ENST00000582071 292 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 MIR548AB-201ENST00000584917 84 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 AC083760.1-201ENST00000589621 670 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 AC022146.1-201ENST00000595307 847 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 AC104662.1-201ENST00000604448 511 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.88□□□□□ -1.79
NR1H2P55055 uc_338.13-201ENST00000618243 179 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.88□□□□□ -1.79
NR1H2P55055 AC093591.3-201ENST00000634516 308 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
NR1H2P55055 TNPO1P3-201ENST00000436471 2662 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
NR1H2P55055 CCT4P2-201ENST00000233836 1548 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.88□□□□□ -1.79
NR1H2P55055 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NR1H2P55055 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
NR1H2P55055 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NR1H2P55055 MTND4P4-201ENST00000439033 1366 ntBASIC3.88□□□□□ -1.79
NR1H2P55055 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.88□□□□□ -1.79
NR1H2P55055 AC092125.1-201ENST00000562568 1995 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NR1H2P55055 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.87□□□□□ -1.79
NR1H2P55055 RNA5SP366-201ENST00000365454 123 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 RNU6-432P-201ENST00000384196 109 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 AP000567.1-201ENST00000406413 156 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NR1H2P55055 RPL17P12-201ENST00000413391 526 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.87□□□□□ -1.79
NR1H2P55055 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.87□□□□□ -1.79
NR1H2P55055 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NR1H2P55055 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.87□□□□□ -1.79
NR1H2P55055 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NR1H2P55055 AL500522.2-201ENST00000448562 343 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 AL162151.2-201ENST00000448875 158 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.87□□□□□ -1.79
NR1H2P55055 RNU6-956P-201ENST00000458868 103 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 RPS27AP17-201ENST00000463344 455 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 AC105137.1-201ENST00000484355 562 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.87□□□□□ -1.79
NR1H2P55055 RN7SKP13-201ENST00000515933 244 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 RNU6-1231P-201ENST00000517185 103 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.87□□□□□ -1.79
NR1H2P55055 ERHP1-201ENST00000523006 310 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.87□□□□□ -1.79
NR1H2P55055 AC006064.5-201ENST00000541782 248 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.87□□□□□ -1.79
NR1H2P55055 AC063950.1-201ENST00000552036 308 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.87□□□□□ -1.79
NR1H2P55055 GNRHR2P1-201ENST00000555315 631 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.87□□□□□ -1.79
NR1H2P55055 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.87□□□□□ -1.79
NR1H2P55055 RPL23AP84-201ENST00000571193 464 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.87□□□□□ -1.79
NR1H2P55055 AC068790.3-201ENST00000602988 553 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 AC113403.1-201ENST00000604910 193 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 AC004908.2-201ENST00000609090 574 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 AC093838.1-201ENST00000613014 469 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 AC025594.3-201ENST00000613068 790 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 AL445567.2-201ENST00000618935 498 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.87□□□□□ -1.79
NR1H2P55055 AC009878.1-201ENST00000621819 340 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.87□□□□□ -1.79
NR1H2P55055 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.87□□□□□ -1.79
NR1H2P55055 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NR1H2P55055 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.87□□□□□ -1.79
NR1H2P55055 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NR1H2P55055 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NR1H2P55055 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
NR1H2P55055 AP001148.1-201ENST00000624124 2359 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 AC118273.1-201ENST00000525324 3006 ntBASIC3.87□□□□□ -1.79
NR1H2P55055 MTND5P33-201ENST00000571250 1450 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 AF117829.1-206ENST00000621883 3802 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.86□□□□□ -1.79
NR1H2P55055 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NR1H2P55055 MIR3065-201ENST00000390137 79 ntBASIC3.86□□□□□ -1.79
NR1H2P55055 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NR1H2P55055 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.86□□□□□ -1.79
NR1H2P55055 RPL23AP26-201ENST00000412728 464 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms