Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HMGCS2P54868 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCS2P54868 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.3□□□□□ -1.88
HMGCS2P54868 AP001148.1-201ENST00000624124 2359 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCS2P54868 RNU6-600P-201ENST00000362524 99 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 RNU6-251P-201ENST00000363235 104 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 RNU1-112P-201ENST00000364401 164 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 RNU6-335P-201ENST00000364563 113 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 RNU6-444P-201ENST00000383988 108 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 MIR34A-201ENST00000385130 110 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 RNU6-1300P-201ENST00000391046 108 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 SKINT1L-201ENST00000401057 817 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 AL161449.1-201ENST00000414531 1199 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 RPL22P18-201ENST00000417197 377 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 AC092634.6-201ENST00000418558 192 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGCS2P54868 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGCS2P54868 DPRXP1-201ENST00000426312 460 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 ARL5AP4-201ENST00000430731 512 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 AC005345.1-201ENST00000431868 217 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
HMGCS2P54868 B3GNT2P1-201ENST00000434960 952 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.3□□□□□ -1.88
HMGCS2P54868 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGCS2P54868 RPL23AP76-201ENST00000441860 458 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 PTENP1-201ENST00000447117 1215 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 AC007327.1-201ENST00000447461 264 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.3□□□□□ -1.88
HMGCS2P54868 RFC5P1-201ENST00000454419 874 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.3□□□□□ -1.88
HMGCS2P54868 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGCS2P54868 AC010486.1-201ENST00000511793 424 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 AC017037.2-201ENST00000513850 890 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 RN7SKP31-201ENST00000516354 278 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 SNORA64.4-201ENST00000516632 81 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 AC087808.1-201ENST00000520501 361 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGCS2P54868 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGCS2P54868 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.3□□□□□ -1.88
HMGCS2P54868 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCS2P54868 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCS2P54868 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGCS2P54868 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCS2P54868 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGCS2P54868 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGCS2P54868 AC093424.1-201ENST00000604999 338 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 AC090425.2-201ENST00000608818 501 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 AC006023.2-201ENST00000609916 167 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 AC140725.3-201ENST00000616193 880 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 AC008147.4-201ENST00000617570 1204 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 AC011330.2-201ENST00000621680 635 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 AC073348.1-201ENST00000623002 331 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 AP000770.2-201ENST00000623694 100 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 AC098679.5-201ENST00000624394 571 ntBASIC3.3□□□□□ -1.88
HMGCS2P54868 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGCS2P54868 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HMGCS2P54868 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCS2P54868 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HMGCS2P54868 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HMGCS2P54868 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.3□□□□□ -1.88
HMGCS2P54868 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.29□□□□□ -1.88
HMGCS2P54868 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HMGCS2P54868 AL049780.3-201ENST00000624612 1583 ntBASIC3.29□□□□□ -1.88
HMGCS2P54868 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HMGCS2P54868 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HMGCS2P54868 DBF4P1-201ENST00000412976 1892 ntBASIC3.29□□□□□ -1.88
HMGCS2P54868 AC109315.1-201ENST00000584143 1347 ntBASIC3.29□□□□□ -1.88
HMGCS2P54868 AL672167.1-206ENST00000356293 943 ntBASIC3.29□□□□□ -1.88
HMGCS2P54868 SNORD56.3-201ENST00000363507 71 ntBASIC3.29□□□□□ -1.88
HMGCS2P54868 RNU6-115P-201ENST00000364310 107 ntBASIC3.29□□□□□ -1.88
HMGCS2P54868 SUGT1P1-201ENST00000379514 476 ntBASIC3.29□□□□□ -1.88
HMGCS2P54868 RNU6-328P-201ENST00000390887 106 ntBASIC3.29□□□□□ -1.88
HMGCS2P54868 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HMGCS2P54868 AL138827.1-201ENST00000402666 306 ntBASIC3.29□□□□□ -1.88
HMGCS2P54868 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
HMGCS2P54868 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.29□□□□□ -1.88
HMGCS2P54868 AC073264.1-201ENST00000411508 416 ntBASIC3.29□□□□□ -1.88
HMGCS2P54868 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.29□□□□□ -1.88
HMGCS2P54868 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
HMGCS2P54868 OOSP1P1-201ENST00000423265 274 ntBASIC3.29□□□□□ -1.88
HMGCS2P54868 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.29□□□□□ -1.88
HMGCS2P54868 USP9YP22-201ENST00000438971 294 ntBASIC3.29□□□□□ -1.88
HMGCS2P54868 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.29□□□□□ -1.88
HMGCS2P54868 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HMGCS2P54868 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
HMGCS2P54868 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.29□□□□□ -1.88
HMGCS2P54868 AC087879.1-201ENST00000474343 374 ntBASIC3.29□□□□□ -1.88
HMGCS2P54868 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.29□□□□□ -1.88
HMGCS2P54868 RN7SL633P-201ENST00000488974 297 ntBASIC3.29□□□□□ -1.88
HMGCS2P54868 RNF138P1-201ENST00000502765 546 ntBASIC3.29□□□□□ -1.88
HMGCS2P54868 AC091951.3-201ENST00000504093 246 ntBASIC3.29□□□□□ -1.88
HMGCS2P54868 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.29□□□□□ -1.88
HMGCS2P54868 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HMGCS2P54868 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.29□□□□□ -1.88
HMGCS2P54868 RNU4-29P-201ENST00000515943 174 ntBASIC3.29□□□□□ -1.88
HMGCS2P54868 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.29□□□□□ -1.88
HMGCS2P54868 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.29□□□□□ -1.88
HMGCS2P54868 MTCYBP41-201ENST00000528913 1123 ntBASIC3.29□□□□□ -1.88
HMGCS2P54868 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms