Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 TPMTP1-201ENST00000592307 737 ntBASIC4.33□□□□□ -1.72
CACNA2D1P54289 AC010680.3-201ENST00000604215 520 ntBASIC4.33□□□□□ -1.72
CACNA2D1P54289 AC012603.1-201ENST00000606424 528 ntBASIC4.33□□□□□ -1.72
CACNA2D1P54289 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.33□□□□□ -1.72
CACNA2D1P54289 AC064836.2-201ENST00000609491 462 ntBASIC4.33□□□□□ -1.72
CACNA2D1P54289 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.33□□□□□ -1.72
CACNA2D1P54289 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.33□□□□□ -1.72
CACNA2D1P54289 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CACNA2D1P54289 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
CACNA2D1P54289 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CACNA2D1P54289 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CACNA2D1P54289 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CACNA2D1P54289 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CACNA2D1P54289 ERCC6-202ENST00000374127 1782 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CACNA2D1P54289 AC134882.1-201ENST00000603738 1676 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CACNA2D1P54289 FAM35DP-201ENST00000323387 2712 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CACNA2D1P54289 AC138915.3-201ENST00000562908 1389 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 OR11H5P-202ENST00000641612 1325 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.32□□□□□ -1.72
CACNA2D1P54289 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CACNA2D1P54289 RNU4-73P-201ENST00000363164 141 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 RN7SKP280-201ENST00000364196 304 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 SNORA57.1-201ENST00000391227 145 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.32□□□□□ -1.72
CACNA2D1P54289 MIR1305-201ENST00000408300 86 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 RNU4-6P-201ENST00000410804 122 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 AC108032.1-201ENST00000416706 207 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.32□□□□□ -1.72
CACNA2D1P54289 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.32□□□□□ -1.72
CACNA2D1P54289 RPL7P28-201ENST00000437739 740 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 RPL23AP89-201ENST00000439324 255 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 RPL17P49-201ENST00000443728 411 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 RPL21P89-201ENST00000444021 467 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 KLRA1P-201ENST00000503499 986 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.32□□□□□ -1.72
CACNA2D1P54289 SCARNA15.1-201ENST00000516384 125 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 MIR2116-201ENST00000517221 80 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.32□□□□□ -1.72
CACNA2D1P54289 CENPUP1-201ENST00000526649 1202 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 AP003181.2-201ENST00000528941 181 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CACNA2D1P54289 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CACNA2D1P54289 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.32□□□□□ -1.72
CACNA2D1P54289 AL389895.1-201ENST00000554127 252 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 AL359212.1-201ENST00000556608 614 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 RPL23AP87-202ENST00000573039 466 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 SNORD39.3-201ENST00000584451 71 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 AC005261.5-201ENST00000596280 355 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 CKS1BP3-201ENST00000600888 237 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 AC011816.2-201ENST00000607089 556 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 AC009159.1-201ENST00000618386 642 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 AC139792.3-201ENST00000623525 224 ntBASIC4.32□□□□□ -1.72
CACNA2D1P54289 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CACNA2D1P54289 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.32□□□□□ -1.72
CACNA2D1P54289 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CACNA2D1P54289 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CACNA2D1P54289 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CACNA2D1P54289 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.32□□□□□ -1.72
CACNA2D1P54289 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA2D1P54289 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA2D1P54289 FAM91A3P-201ENST00000456826 2544 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA2D1P54289 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA2D1P54289 GNG5P1-201ENST00000255500 204 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 RNA5SP388-201ENST00000362584 119 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 SNORD56.2-201ENST00000363242 71 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 Y_RNA.279-201ENST00000364763 95 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 Y_RNA.529-201ENST00000384586 119 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 AL356057.2-201ENST00000403318 432 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 RN7SKP266-201ENST00000410232 287 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.31□□□□□ -1.72
CACNA2D1P54289 ZNF90P2-204ENST00000419323 1075 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 SDCBPP2-201ENST00000424643 885 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 AL031736.2-201ENST00000426573 787 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 AC008850.1-201ENST00000427546 362 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.31□□□□□ -1.72
CACNA2D1P54289 RPL22P17-201ENST00000438729 315 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 SDCBPP1-201ENST00000440192 890 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.31□□□□□ -1.72
CACNA2D1P54289 RPS11P1-201ENST00000451072 473 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.31□□□□□ -1.72
CACNA2D1P54289 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.31□□□□□ -1.72
CACNA2D1P54289 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
CACNA2D1P54289 RNU6-1281P-201ENST00000516223 105 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 Y_RNA.672-201ENST00000516289 104 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 RNU7-143P-201ENST00000516781 65 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.31□□□□□ -1.72
CACNA2D1P54289 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.31□□□□□ -1.72
CACNA2D1P54289 CBX3P5-201ENST00000552017 521 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 HMGB3P26-201ENST00000560051 582 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 AL845331.3-202ENST00000562856 261 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 RN7SL703P-201ENST00000578485 302 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.31□□□□□ -1.72
CACNA2D1P54289 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 AC012507.3-201ENST00000603556 477 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 AC245014.2-201ENST00000603689 287 ntBASIC4.31□□□□□ -1.72
CACNA2D1P54289 AC246785.4-201ENST00000605374 287 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms