Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 RN7SL271P-201ENST00000487601 295 ntBASIC3.18□□□□□ -1.9
CDX1P47902 AC010486.2-201ENST00000505572 483 ntBASIC3.18□□□□□ -1.9
CDX1P47902 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.18□□□□□ -1.9
CDX1P47902 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.18□□□□□ -1.9
CDX1P47902 GMPSP1-201ENST00000514075 579 ntBASIC3.18□□□□□ -1.9
CDX1P47902 AC116347.2-201ENST00000514912 523 ntBASIC3.18□□□□□ -1.9
CDX1P47902 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.18□□□□□ -1.9
CDX1P47902 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.18□□□□□ -1.9
CDX1P47902 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.18□□□□□ -1.9
CDX1P47902 AC022690.1-201ENST00000526681 550 ntBASIC3.18□□□□□ -1.9
CDX1P47902 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.18□□□□□ -1.9
CDX1P47902 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.18□□□□□ -1.9
CDX1P47902 PCMTD1P2-201ENST00000565017 355 ntBASIC3.18□□□□□ -1.9
CDX1P47902 MIR4307-201ENST00000582802 84 ntBASIC3.18□□□□□ -1.9
CDX1P47902 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.18□□□□□ -1.9
CDX1P47902 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.18□□□□□ -1.9
CDX1P47902 BCRP9-201ENST00000605312 388 ntBASIC3.18□□□□□ -1.9
CDX1P47902 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.18□□□□□ -1.9
CDX1P47902 AP003485.2-201ENST00000623636 610 ntBASIC3.18□□□□□ -1.9
CDX1P47902 AC079248.2-201ENST00000623779 326 ntBASIC3.18□□□□□ -1.9
CDX1P47902 AC112204.3-201ENST00000623822 332 ntBASIC3.18□□□□□ -1.9
CDX1P47902 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CDX1P47902 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.18□□□□□ -1.9
CDX1P47902 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.18□□□□□ -1.9
CDX1P47902 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDX1P47902 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CDX1P47902 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDX1P47902 AC006378.2-201ENST00000623178 2476 ntBASIC3.18□□□□□ -1.9
CDX1P47902 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.18□□□□□ -1.9
CDX1P47902 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.18□□□□□ -1.9
CDX1P47902 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CDX1P47902 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
CDX1P47902 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.17□□□□□ -1.9
CDX1P47902 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
CDX1P47902 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.17□□□□□ -1.9
CDX1P47902 ZNF807-201ENST00000328088 1707 ntBASIC3.17□□□□□ -1.9
CDX1P47902 RNU6-500P-201ENST00000362349 107 ntBASIC3.17□□□□□ -1.9
CDX1P47902 RNU5F-7P-201ENST00000363696 115 ntBASIC3.17□□□□□ -1.9
CDX1P47902 Y_RNA.169-201ENST00000363745 96 ntBASIC3.17□□□□□ -1.9
CDX1P47902 RNU1-64P-201ENST00000365443 163 ntBASIC3.17□□□□□ -1.9
CDX1P47902 RNA5SP283-201ENST00000365604 119 ntBASIC3.17□□□□□ -1.9
CDX1P47902 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDX1P47902 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDX1P47902 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CDX1P47902 U8.14-201ENST00000390843 143 ntBASIC3.17□□□□□ -1.9
CDX1P47902 RNU6-754P-201ENST00000391166 107 ntBASIC3.17□□□□□ -1.9
CDX1P47902 AL049545.1-201ENST00000401856 572 ntBASIC3.17□□□□□ -1.9
CDX1P47902 RPL21P65-201ENST00000406094 466 ntBASIC3.17□□□□□ -1.9
CDX1P47902 MIR1290-201ENST00000408735 78 ntBASIC3.17□□□□□ -1.9
CDX1P47902 HSPE1P12-201ENST00000412576 301 ntBASIC3.17□□□□□ -1.9
CDX1P47902 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.17□□□□□ -1.9
CDX1P47902 RPL21P109-201ENST00000422213 475 ntBASIC3.17□□□□□ -1.9
CDX1P47902 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.17□□□□□ -1.9
CDX1P47902 AC233728.2-201ENST00000425348 757 ntBASIC3.17□□□□□ -1.9
CDX1P47902 RPL7L1P10-201ENST00000427790 463 ntBASIC3.17□□□□□ -1.9
CDX1P47902 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.17□□□□□ -1.9
CDX1P47902 NEK4P1-201ENST00000433383 879 ntBASIC3.17□□□□□ -1.9
CDX1P47902 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.17□□□□□ -1.9
CDX1P47902 SNRPEP4-201ENST00000435815 279 ntBASIC3.17□□□□□ -1.9
CDX1P47902 RPL37P21-201ENST00000435890 276 ntBASIC3.17□□□□□ -1.9
CDX1P47902 RPL17P49-201ENST00000443728 411 ntBASIC3.17□□□□□ -1.9
CDX1P47902 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.17□□□□□ -1.9
CDX1P47902 AC006539.3-201ENST00000454258 129 ntBASIC3.17□□□□□ -1.9
CDX1P47902 RNA5SP310-201ENST00000459084 116 ntBASIC3.17□□□□□ -1.9
CDX1P47902 HSPE1P6-201ENST00000479457 291 ntBASIC3.17□□□□□ -1.9
CDX1P47902 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.17□□□□□ -1.9
CDX1P47902 AC093824.1-201ENST00000508796 343 ntBASIC3.17□□□□□ -1.9
CDX1P47902 AC026726.1-201ENST00000512859 601 ntBASIC3.17□□□□□ -1.9
CDX1P47902 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.17□□□□□ -1.9
CDX1P47902 SNORA31.22-201ENST00000517204 135 ntBASIC3.17□□□□□ -1.9
CDX1P47902 RNU6-840P-201ENST00000517275 65 ntBASIC3.17□□□□□ -1.9
CDX1P47902 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.17□□□□□ -1.9
CDX1P47902 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.17□□□□□ -1.9
CDX1P47902 HIGD1AP10-201ENST00000527837 282 ntBASIC3.17□□□□□ -1.9
CDX1P47902 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDX1P47902 AC008011.1-201ENST00000545989 227 ntBASIC3.17□□□□□ -1.9
CDX1P47902 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.17□□□□□ -1.9
CDX1P47902 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.17□□□□□ -1.9
CDX1P47902 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.17□□□□□ -1.9
CDX1P47902 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.17□□□□□ -1.9
CDX1P47902 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.17□□□□□ -1.9
CDX1P47902 MIR5684-201ENST00000585074 65 ntBASIC3.17□□□□□ -1.9
CDX1P47902 UBE2L4-201ENST00000587688 464 ntBASIC3.17□□□□□ -1.9
CDX1P47902 TPMTP1-201ENST00000592307 737 ntBASIC3.17□□□□□ -1.9
CDX1P47902 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.17□□□□□ -1.9
CDX1P47902 AC008962.1-201ENST00000605729 304 ntBASIC3.17□□□□□ -1.9
CDX1P47902 AC099778.2-201ENST00000610904 211 ntBASIC3.17□□□□□ -1.9
CDX1P47902 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.17□□□□□ -1.9
CDX1P47902 AC068831.7-201ENST00000616954 363 ntBASIC3.17□□□□□ -1.9
CDX1P47902 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
CDX1P47902 AL158801.5-201ENST00000623123 465 ntBASIC3.17□□□□□ -1.9
CDX1P47902 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.17□□□□□ -1.9
CDX1P47902 AC006927.3-201ENST00000638789 384 ntBASIC3.17□□□□□ -1.9
CDX1P47902 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.17□□□□□ -1.9
CDX1P47902 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.17□□□□□ -1.9
CDX1P47902 CCT4P2-201ENST00000233836 1548 ntBASIC3.17□□□□□ -1.9
CDX1P47902 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDX1P47902 MFSD8-236ENST00000641509 4050 ntBASIC3.17□□□□□ -1.9
CDX1P47902 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.17□□□□□ -1.9
CDX1P47902 AC012321.1-201ENST00000561622 1588 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms