Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC010680.4-201ENST00000605334 543 ntBASIC4.09□□□□□ -1.75
MMP13P45452 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.09□□□□□ -1.75
MMP13P45452 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.09□□□□□ -1.75
MMP13P45452 AL359697.1-201ENST00000624879 587 ntBASIC4.09□□□□□ -1.75
MMP13P45452 AC099654.5-201ENST00000636479 350 ntBASIC4.09□□□□□ -1.75
MMP13P45452 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.09□□□□□ -1.75
MMP13P45452 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.09□□□□□ -1.75
MMP13P45452 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
MMP13P45452 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
MMP13P45452 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
MMP13P45452 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
MMP13P45452 RLIMP1-201ENST00000339626 1680 ntBASIC4.09□□□□□ -1.76
MMP13P45452 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.09□□□□□ -1.76
MMP13P45452 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.09□□□□□ -1.76
MMP13P45452 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MMP13P45452 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.08□□□□□ -1.76
MMP13P45452 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.08□□□□□ -1.76
MMP13P45452 OR4A15-201ENST00000314706 1035 ntBASIC4.08□□□□□ -1.76
MMP13P45452 CBX3P1-201ENST00000325243 554 ntBASIC4.08□□□□□ -1.76
MMP13P45452 RNA5SP391-201ENST00000363456 119 ntBASIC4.08□□□□□ -1.76
MMP13P45452 RNU6-289P-201ENST00000364093 107 ntBASIC4.08□□□□□ -1.76
MMP13P45452 Y_RNA.295-201ENST00000364918 102 ntBASIC4.08□□□□□ -1.76
MMP13P45452 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
MMP13P45452 RNU6-769P-201ENST00000384407 104 ntBASIC4.08□□□□□ -1.76
MMP13P45452 Y_RNA.509-201ENST00000384506 99 ntBASIC4.08□□□□□ -1.76
MMP13P45452 SNRPEP2-201ENST00000397592 279 ntBASIC4.08□□□□□ -1.76
MMP13P45452 RNU4-55P-201ENST00000410731 137 ntBASIC4.08□□□□□ -1.76
MMP13P45452 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.08□□□□□ -1.76
MMP13P45452 HMGB3P20-201ENST00000417997 600 ntBASIC4.08□□□□□ -1.76
MMP13P45452 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.08□□□□□ -1.76
MMP13P45452 AL691449.1-201ENST00000426570 421 ntBASIC4.08□□□□□ -1.76
MMP13P45452 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.08□□□□□ -1.76
MMP13P45452 RPS27AP12-201ENST00000429552 465 ntBASIC4.08□□□□□ -1.76
MMP13P45452 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.08□□□□□ -1.76
MMP13P45452 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.08□□□□□ -1.76
MMP13P45452 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.08□□□□□ -1.76
MMP13P45452 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MMP13P45452 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.08□□□□□ -1.76
MMP13P45452 RPS11P1-201ENST00000451072 473 ntBASIC4.08□□□□□ -1.76
MMP13P45452 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.08□□□□□ -1.76
MMP13P45452 Z82190.1-201ENST00000454534 490 ntBASIC4.08□□□□□ -1.76
MMP13P45452 SNRPFP4-201ENST00000456366 242 ntBASIC4.08□□□□□ -1.76
MMP13P45452 MTCO1P42-201ENST00000457379 726 ntBASIC4.08□□□□□ -1.76
MMP13P45452 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.08□□□□□ -1.76
MMP13P45452 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.08□□□□□ -1.76
MMP13P45452 RBM43P1-201ENST00000476891 1081 ntBASIC4.08□□□□□ -1.76
MMP13P45452 AL132838.2-201ENST00000492041 314 ntBASIC4.08□□□□□ -1.76
MMP13P45452 HMGN1P12-201ENST00000499125 195 ntBASIC4.08□□□□□ -1.76
MMP13P45452 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.08□□□□□ -1.76
MMP13P45452 AC093809.1-201ENST00000509155 340 ntBASIC4.08□□□□□ -1.76
MMP13P45452 AC026412.2-201ENST00000512270 1075 ntBASIC4.08□□□□□ -1.76
MMP13P45452 MTND5P4-201ENST00000514978 288 ntBASIC4.08□□□□□ -1.76
MMP13P45452 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.08□□□□□ -1.76
MMP13P45452 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.08□□□□□ -1.76
MMP13P45452 OR8L1P-201ENST00000534005 955 ntBASIC4.08□□□□□ -1.76
MMP13P45452 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.08□□□□□ -1.76
MMP13P45452 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.08□□□□□ -1.76
MMP13P45452 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.08□□□□□ -1.76
MMP13P45452 LARP7P2-201ENST00000575306 125 ntBASIC4.08□□□□□ -1.76
MMP13P45452 AP001180.3-201ENST00000582221 145 ntBASIC4.08□□□□□ -1.76
MMP13P45452 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.08□□□□□ -1.76
MMP13P45452 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.08□□□□□ -1.76
MMP13P45452 AC022916.3-201ENST00000592961 742 ntBASIC4.08□□□□□ -1.76
MMP13P45452 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
MMP13P45452 AL391646.1-201ENST00000603860 190 ntBASIC4.08□□□□□ -1.76
MMP13P45452 AC008277.2-201ENST00000605196 797 ntBASIC4.08□□□□□ -1.76
MMP13P45452 OR6R2P-201ENST00000609216 300 ntBASIC4.08□□□□□ -1.76
MMP13P45452 AC103710.1-201ENST00000610003 901 ntBASIC4.08□□□□□ -1.76
MMP13P45452 AL020991.1-201ENST00000612314 373 ntBASIC4.08□□□□□ -1.76
MMP13P45452 AC243773.3-201ENST00000613270 256 ntBASIC4.08□□□□□ -1.76
MMP13P45452 MIR6864-201ENST00000617935 70 ntBASIC4.08□□□□□ -1.76
MMP13P45452 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.08□□□□□ -1.76
MMP13P45452 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.08□□□□□ -1.76
MMP13P45452 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
MMP13P45452 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.08□□□□□ -1.76
MMP13P45452 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MMP13P45452 MAPK10-373ENST00000641983 6772 ntBASIC4.07□□□□□ -1.76
MMP13P45452 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.07□□□□□ -1.76
MMP13P45452 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
MMP13P45452 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
MMP13P45452 RNY4P34-201ENST00000364779 95 ntBASIC4.07□□□□□ -1.76
MMP13P45452 RNU6-483P-201ENST00000384088 108 ntBASIC4.07□□□□□ -1.76
MMP13P45452 RNU1-13P-201ENST00000384499 162 ntBASIC4.07□□□□□ -1.76
MMP13P45452 snosnR66.1-201ENST00000391095 99 ntBASIC4.07□□□□□ -1.76
MMP13P45452 RNU4-6P-201ENST00000410804 122 ntBASIC4.07□□□□□ -1.76
MMP13P45452 RPL21P109-201ENST00000422213 475 ntBASIC4.07□□□□□ -1.76
MMP13P45452 MTCO1P20-201ENST00000425366 358 ntBASIC4.07□□□□□ -1.76
MMP13P45452 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.07□□□□□ -1.76
MMP13P45452 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.07□□□□□ -1.76
MMP13P45452 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.07□□□□□ -1.76
MMP13P45452 MTCO2P11-201ENST00000431069 680 ntBASIC4.07□□□□□ -1.76
MMP13P45452 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.07□□□□□ -1.76
MMP13P45452 AC010881.1-201ENST00000433830 235 ntBASIC4.07□□□□□ -1.76
MMP13P45452 RSU1P2-202ENST00000437884 485 ntBASIC4.07□□□□□ -1.76
MMP13P45452 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.07□□□□□ -1.76
MMP13P45452 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.07□□□□□ -1.76
MMP13P45452 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.07□□□□□ -1.76
MMP13P45452 MTCO1P48-201ENST00000448024 1096 ntBASIC4.07□□□□□ -1.76
MMP13P45452 MTCO3P20-201ENST00000454926 688 ntBASIC4.07□□□□□ -1.76
MMP13P45452 OR6K1P-201ENST00000456766 971 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms