Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.76□□□□□ -1.81
HADHAP40939 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.76□□□□□ -1.81
HADHAP40939 AC090616.2-202ENST00000584248 222 ntBASIC3.76□□□□□ -1.81
HADHAP40939 AP001330.4-201ENST00000604350 154 ntBASIC3.76□□□□□ -1.81
HADHAP40939 MIR92B-201ENST00000607575 96 ntBASIC3.76□□□□□ -1.81
HADHAP40939 AC106028.5-201ENST00000610332 395 ntBASIC3.76□□□□□ -1.81
HADHAP40939 AC004223.4-201ENST00000612426 332 ntBASIC3.76□□□□□ -1.81
HADHAP40939 AC008147.4-201ENST00000617570 1204 ntBASIC3.76□□□□□ -1.81
HADHAP40939 AC079684.1-201ENST00000621405 437 ntBASIC3.76□□□□□ -1.81
HADHAP40939 AC009268.2-201ENST00000621925 457 ntBASIC3.76□□□□□ -1.81
HADHAP40939 AP003485.2-201ENST00000623636 610 ntBASIC3.76□□□□□ -1.81
HADHAP40939 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.76□□□□□ -1.81
HADHAP40939 OR8B1P-202ENST00000641132 1178 ntBASIC3.76□□□□□ -1.81
HADHAP40939 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HADHAP40939 OR6C71P-202ENST00000641886 1107 ntBASIC3.76□□□□□ -1.81
HADHAP40939 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HADHAP40939 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HADHAP40939 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HADHAP40939 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HADHAP40939 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.75□□□□□ -1.81
HADHAP40939 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.75□□□□□ -1.81
HADHAP40939 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HADHAP40939 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HADHAP40939 RNU6-500P-201ENST00000362349 107 ntBASIC3.75□□□□□ -1.81
HADHAP40939 RNU6-1078P-201ENST00000364522 103 ntBASIC3.75□□□□□ -1.81
HADHAP40939 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.75□□□□□ -1.81
HADHAP40939 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
HADHAP40939 MIR200C-201ENST00000384980 68 ntBASIC3.75□□□□□ -1.81
HADHAP40939 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HADHAP40939 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.75□□□□□ -1.81
HADHAP40939 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.75□□□□□ -1.81
HADHAP40939 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.75□□□□□ -1.81
HADHAP40939 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.75□□□□□ -1.81
HADHAP40939 LSM1P1-201ENST00000438629 273 ntBASIC3.75□□□□□ -1.81
HADHAP40939 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.75□□□□□ -1.81
HADHAP40939 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.75□□□□□ -1.81
HADHAP40939 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.75□□□□□ -1.81
HADHAP40939 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.75□□□□□ -1.81
HADHAP40939 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.75□□□□□ -1.81
HADHAP40939 AC091564.1-201ENST00000464563 479 ntBASIC3.75□□□□□ -1.81
HADHAP40939 RPL30P6-201ENST00000475925 342 ntBASIC3.75□□□□□ -1.81
HADHAP40939 AC012181.1-201ENST00000479895 423 ntBASIC3.75□□□□□ -1.81
HADHAP40939 HMGB1P36-201ENST00000487709 576 ntBASIC3.75□□□□□ -1.81
HADHAP40939 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.75□□□□□ -1.81
HADHAP40939 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.75□□□□□ -1.81
HADHAP40939 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.75□□□□□ -1.81
HADHAP40939 SCARNA14-201ENST00000516903 136 ntBASIC3.75□□□□□ -1.81
HADHAP40939 RNU6-352P-201ENST00000516908 107 ntBASIC3.75□□□□□ -1.81
HADHAP40939 RNU6-1231P-201ENST00000517185 103 ntBASIC3.75□□□□□ -1.81
HADHAP40939 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.75□□□□□ -1.81
HADHAP40939 AC008015.1-201ENST00000555505 465 ntBASIC3.75□□□□□ -1.81
HADHAP40939 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.75□□□□□ -1.81
HADHAP40939 AL121576.1-201ENST00000556055 276 ntBASIC3.75□□□□□ -1.81
HADHAP40939 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.75□□□□□ -1.81
HADHAP40939 OR4K8P-201ENST00000578842 1048 ntBASIC3.75□□□□□ -1.81
HADHAP40939 MIR4429-201ENST00000580105 73 ntBASIC3.75□□□□□ -1.81
HADHAP40939 MIR5187-201ENST00000583479 76 ntBASIC3.75□□□□□ -1.81
HADHAP40939 AC097468.3-201ENST00000607956 456 ntBASIC3.75□□□□□ -1.81
HADHAP40939 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.75□□□□□ -1.81
HADHAP40939 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.75□□□□□ -1.81
HADHAP40939 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HADHAP40939 AC079248.2-201ENST00000623779 326 ntBASIC3.75□□□□□ -1.81
HADHAP40939 AC244258.1-201ENST00000637553 1071 ntBASIC3.75□□□□□ -1.81
HADHAP40939 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HADHAP40939 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HADHAP40939 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HADHAP40939 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
HADHAP40939 AC009812.4-201ENST00000569134 1805 ntBASIC3.74□□□□□ -1.81
HADHAP40939 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.74□□□□□ -1.81
HADHAP40939 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.74□□□□□ -1.81
HADHAP40939 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
HADHAP40939 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HADHAP40939 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HADHAP40939 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.74□□□□□ -1.81
HADHAP40939 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.74□□□□□ -1.81
HADHAP40939 AL590704.1-201ENST00000402856 794 ntBASIC3.74□□□□□ -1.81
HADHAP40939 SNORA57.3-201ENST00000411095 141 ntBASIC3.74□□□□□ -1.81
HADHAP40939 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.74□□□□□ -1.81
HADHAP40939 HMGB3P23-201ENST00000414981 585 ntBASIC3.74□□□□□ -1.81
HADHAP40939 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.74□□□□□ -1.81
HADHAP40939 AL139247.1-201ENST00000422768 325 ntBASIC3.74□□□□□ -1.81
HADHAP40939 AL365203.2-201ENST00000423444 196 ntBASIC3.74□□□□□ -1.81
HADHAP40939 AC079780.1-201ENST00000428259 207 ntBASIC3.74□□□□□ -1.81
HADHAP40939 AL512649.1-201ENST00000428997 581 ntBASIC3.74□□□□□ -1.81
HADHAP40939 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.74□□□□□ -1.81
HADHAP40939 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.74□□□□□ -1.81
HADHAP40939 CETN4P-201ENST00000432407 469 ntBASIC3.74□□□□□ -1.81
HADHAP40939 AL117351.1-201ENST00000438864 766 ntBASIC3.74□□□□□ -1.81
HADHAP40939 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.74□□□□□ -1.81
HADHAP40939 AL831737.1-201ENST00000441288 271 ntBASIC3.74□□□□□ -1.81
HADHAP40939 RAC1P7-201ENST00000445367 377 ntBASIC3.74□□□□□ -1.81
HADHAP40939 VN1R34P-201ENST00000447387 883 ntBASIC3.74□□□□□ -1.81
HADHAP40939 SSXP4-201ENST00000451349 245 ntBASIC3.74□□□□□ -1.81
HADHAP40939 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.74□□□□□ -1.81
HADHAP40939 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.74□□□□□ -1.81
HADHAP40939 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.74□□□□□ -1.81
HADHAP40939 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.74□□□□□ -1.81
HADHAP40939 AC026801.2-201ENST00000515352 425 ntBASIC3.74□□□□□ -1.81
HADHAP40939 HMGN1P28-201ENST00000521340 364 ntBASIC3.74□□□□□ -1.81
HADHAP40939 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms