Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC016769.3-201ENST00000396562 315 ntBASIC2.7□□□□□ -1.98
RFC3P40938 MTND4P13-201ENST00000402078 1023 ntBASIC2.7□□□□□ -1.98
RFC3P40938 AL136372.1-201ENST00000403060 228 ntBASIC2.7□□□□□ -1.98
RFC3P40938 SNORA11.2-201ENST00000408318 127 ntBASIC2.7□□□□□ -1.98
RFC3P40938 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.7□□□□□ -1.98
RFC3P40938 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.7□□□□□ -1.98
RFC3P40938 BOLA3P4-201ENST00000418151 400 ntBASIC2.7□□□□□ -1.98
RFC3P40938 AC027644.1-201ENST00000419595 298 ntBASIC2.7□□□□□ -1.98
RFC3P40938 RPL7P30-201ENST00000420888 709 ntBASIC2.7□□□□□ -1.98
RFC3P40938 Z93242.1-201ENST00000427102 353 ntBASIC2.7□□□□□ -1.98
RFC3P40938 MTCYBP32-201ENST00000427945 1084 ntBASIC2.7□□□□□ -1.98
RFC3P40938 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.7□□□□□ -1.98
RFC3P40938 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.7□□□□□ -1.98
RFC3P40938 MTCYBP15-201ENST00000433123 1127 ntBASIC2.7□□□□□ -1.98
RFC3P40938 AL135938.1-201ENST00000443141 297 ntBASIC2.7□□□□□ -1.98
RFC3P40938 AL096829.2-201ENST00000446582 742 ntBASIC2.7□□□□□ -1.98
RFC3P40938 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RFC3P40938 AC111000.2-201ENST00000507775 550 ntBASIC2.7□□□□□ -1.98
RFC3P40938 AC091826.1-201ENST00000514065 313 ntBASIC2.7□□□□□ -1.98
RFC3P40938 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.7□□□□□ -1.98
RFC3P40938 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.7□□□□□ -1.98
RFC3P40938 RNU6-334P-201ENST00000517072 102 ntBASIC2.7□□□□□ -1.98
RFC3P40938 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.7□□□□□ -1.98
RFC3P40938 AP001804.3-201ENST00000525146 880 ntBASIC2.7□□□□□ -1.98
RFC3P40938 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.7□□□□□ -1.98
RFC3P40938 AP003049.1-201ENST00000529418 457 ntBASIC2.7□□□□□ -1.98
RFC3P40938 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.7□□□□□ -1.98
RFC3P40938 AC008127.2-201ENST00000549925 1075 ntBASIC2.7□□□□□ -1.98
RFC3P40938 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.7□□□□□ -1.98
RFC3P40938 SETP2-201ENST00000553886 926 ntBASIC2.7□□□□□ -1.98
RFC3P40938 MTCYBP27-201ENST00000555160 670 ntBASIC2.7□□□□□ -1.98
RFC3P40938 AC015871.2-201ENST00000603605 948 ntBASIC2.7□□□□□ -1.98
RFC3P40938 AC106900.2-201ENST00000604994 317 ntBASIC2.7□□□□□ -1.98
RFC3P40938 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.7□□□□□ -1.98
RFC3P40938 AP005137.2-201ENST00000609238 400 ntBASIC2.7□□□□□ -1.98
RFC3P40938 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.7□□□□□ -1.98
RFC3P40938 AL512506.1-201ENST00000613918 449 ntBASIC2.7□□□□□ -1.98
RFC3P40938 AC080188.3-201ENST00000624842 748 ntBASIC2.7□□□□□ -1.98
RFC3P40938 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RFC3P40938 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.7□□□□□ -1.98
RFC3P40938 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RFC3P40938 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
RFC3P40938 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.7□□□□□ -1.98
RFC3P40938 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.69□□□□□ -1.98
RFC3P40938 AL513185.3-201ENST00000433335 1300 ntBASIC2.69□□□□□ -1.98
RFC3P40938 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
RFC3P40938 RPL21P75-201ENST00000396599 483 ntBASIC2.69□□□□□ -1.98
RFC3P40938 RPL21P28-201ENST00000401418 483 ntBASIC2.69□□□□□ -1.98
RFC3P40938 AL592114.1-201ENST00000403842 483 ntBASIC2.69□□□□□ -1.98
RFC3P40938 AL592148.1-201ENST00000413568 445 ntBASIC2.69□□□□□ -1.98
RFC3P40938 MTCO2P1-201ENST00000424648 477 ntBASIC2.69□□□□□ -1.98
RFC3P40938 FO393414.1-201ENST00000428697 1184 ntBASIC2.69□□□□□ -1.98
RFC3P40938 AL512637.2-201ENST00000431287 1256 ntBASIC2.69□□□□□ -1.98
RFC3P40938 AC109583.1-201ENST00000432156 268 ntBASIC2.69□□□□□ -1.98
RFC3P40938 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RFC3P40938 RPS12P18-201ENST00000442381 270 ntBASIC2.69□□□□□ -1.98
RFC3P40938 HMGB3P6-201ENST00000444896 598 ntBASIC2.69□□□□□ -1.98
RFC3P40938 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.69□□□□□ -1.98
RFC3P40938 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.69□□□□□ -1.98
RFC3P40938 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.69□□□□□ -1.98
RFC3P40938 RPL21P39-201ENST00000463605 483 ntBASIC2.69□□□□□ -1.98
RFC3P40938 AC011979.1-201ENST00000472300 483 ntBASIC2.69□□□□□ -1.98
RFC3P40938 ST13P14-201ENST00000474095 734 ntBASIC2.69□□□□□ -1.98
RFC3P40938 RPL21P93-201ENST00000480465 489 ntBASIC2.69□□□□□ -1.98
RFC3P40938 AC233702.1-201ENST00000482905 502 ntBASIC2.69□□□□□ -1.98
RFC3P40938 AC087190.1-201ENST00000484462 480 ntBASIC2.69□□□□□ -1.98
RFC3P40938 AC093591.1-201ENST00000491435 481 ntBASIC2.69□□□□□ -1.98
RFC3P40938 RPL21P16-201ENST00000495531 483 ntBASIC2.69□□□□□ -1.98
RFC3P40938 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.69□□□□□ -1.98
RFC3P40938 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.69□□□□□ -1.98
RFC3P40938 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.69□□□□□ -1.98
RFC3P40938 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.69□□□□□ -1.98
RFC3P40938 GTF3AP2-201ENST00000557014 266 ntBASIC2.69□□□□□ -1.98
RFC3P40938 CYCSP39-201ENST00000565821 309 ntBASIC2.69□□□□□ -1.98
RFC3P40938 AP001542.2-201ENST00000593141 364 ntBASIC2.69□□□□□ -1.98
RFC3P40938 VN1R90P-201ENST00000595717 726 ntBASIC2.69□□□□□ -1.98
RFC3P40938 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.69□□□□□ -1.98
RFC3P40938 AC005776.1-201ENST00000603164 290 ntBASIC2.69□□□□□ -1.98
RFC3P40938 AP000238.1-201ENST00000608759 426 ntBASIC2.69□□□□□ -1.98
RFC3P40938 CYCSP41-201ENST00000616920 296 ntBASIC2.69□□□□□ -1.98
RFC3P40938 AC078880.5-201ENST00000617845 421 ntBASIC2.69□□□□□ -1.98
RFC3P40938 AC091046.2-201ENST00000620775 665 ntBASIC2.69□□□□□ -1.98
RFC3P40938 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.69□□□□□ -1.98
RFC3P40938 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
RFC3P40938 AP002907.1-201ENST00000606361 1430 ntBASIC2.68□□□□□ -1.98
RFC3P40938 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RFC3P40938 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
RFC3P40938 RNU5D-1-201ENST00000363299 116 ntBASIC2.68□□□□□ -1.98
RFC3P40938 RNU6-1155P-201ENST00000363554 107 ntBASIC2.68□□□□□ -1.98
RFC3P40938 RNU6-173P-201ENST00000364215 104 ntBASIC2.68□□□□□ -1.98
RFC3P40938 ARF4P3-201ENST00000397387 509 ntBASIC2.68□□□□□ -1.98
RFC3P40938 RPS4XP3-201ENST00000398541 413 ntBASIC2.68□□□□□ -1.98
RFC3P40938 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.68□□□□□ -1.98
RFC3P40938 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
RFC3P40938 AC004866.2-201ENST00000438285 481 ntBASIC2.68□□□□□ -1.98
RFC3P40938 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.68□□□□□ -1.98
RFC3P40938 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.68□□□□□ -1.98
RFC3P40938 OR6K5P-201ENST00000447050 945 ntBASIC2.68□□□□□ -1.98
RFC3P40938 RPL23AP20-201ENST00000447965 421 ntBASIC2.68□□□□□ -1.98
RFC3P40938 AL590664.1-201ENST00000448065 339 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms