Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC006390.1-201ENST00000508068 283 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 NDUFB4P2-201ENST00000509515 391 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 AC004062.1-201ENST00000509926 645 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXD12P35452 SNORA70.14-201ENST00000516205 110 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXD12P35452 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXD12P35452 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXD12P35452 AC022878.1-201ENST00000530684 149 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXD12P35452 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.17□□□□□ -1.74
HOXD12P35452 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXD12P35452 AC009063.1-201ENST00000563342 702 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 CYP4A43P-201ENST00000568156 121 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXD12P35452 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXD12P35452 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXD12P35452 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXD12P35452 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.17□□□□□ -1.74
HOXD12P35452 AC092794.1-201ENST00000612734 582 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 AC008250.2-201ENST00000615261 205 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 AC108479.2-201ENST00000617314 601 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXD12P35452 AL445264.1-201ENST00000621719 171 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 CR392039.5-201ENST00000623201 510 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 AC007546.2-201ENST00000623996 360 ntBASIC4.17□□□□□ -1.74
HOXD12P35452 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXD12P35452 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXD12P35452 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXD12P35452 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXD12P35452 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXD12P35452 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXD12P35452 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXD12P35452 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXD12P35452 RNU6-343P-201ENST00000364709 104 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 RNU6-259P-201ENST00000383999 107 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 RNU1-89P-201ENST00000384592 164 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXD12P35452 RNU6-712P-201ENST00000410558 100 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 RNU2-15P-201ENST00000410692 191 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXD12P35452 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXD12P35452 GLRXP1-201ENST00000423261 334 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXD12P35452 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXD12P35452 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXD12P35452 AC017083.1-201ENST00000428093 483 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXD12P35452 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXD12P35452 AC091862.1-201ENST00000438016 1100 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXD12P35452 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXD12P35452 AC093899.1-201ENST00000457984 376 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 snoU13.4-201ENST00000458916 104 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 SNRPGP3-201ENST00000469405 227 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 AC104563.1-201ENST00000476147 376 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
HOXD12P35452 AC110792.1-201ENST00000491826 472 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 NIPA2P2-201ENST00000496376 1083 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 AC138853.1-201ENST00000503549 823 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 IGKV2D-19-201ENST00000523346 262 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 AC016957.1-201ENST00000534895 309 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXD12P35452 RPL23AP97-201ENST00000568955 471 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 AC137800.2-201ENST00000574375 120 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXD12P35452 TPMTP1-201ENST00000592307 737 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 XIAPP1-201ENST00000603162 600 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 AC112191.3-201ENST00000604371 277 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXD12P35452 SNORA51-201ENST00000606420 132 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXD12P35452 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.16□□□□□ -1.74
HOXD12P35452 AC098614.4-201ENST00000607601 462 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 AP002360.3-201ENST00000607673 710 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXD12P35452 AC138749.5-201ENST00000611461 208 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 AC131902.3-201ENST00000611767 581 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 AC116165.2-201ENST00000616705 206 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 AC104010.1-201ENST00000616889 150 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 AL139089.1-201ENST00000620372 975 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 AC004009.2-201ENST00000623016 728 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXD12P35452 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXD12P35452 AC099654.12-201ENST00000639868 649 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXD12P35452 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXD12P35452 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXD12P35452 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.16□□□□□ -1.74
HOXD12P35452 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXD12P35452 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HOXD12P35452 AL049780.3-201ENST00000624612 1583 ntBASIC4.15□□□□□ -1.74
HOXD12P35452 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HOXD12P35452 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.15□□□□□ -1.74
HOXD12P35452 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HOXD12P35452 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HOXD12P35452 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HOXD12P35452 RNU6-50P-201ENST00000362356 103 ntBASIC4.15□□□□□ -1.75
HOXD12P35452 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.15□□□□□ -1.75
HOXD12P35452 MIR7-3-201ENST00000384898 110 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms