Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC009220.3-201ENST00000604318 586 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 AC090425.2-201ENST00000608818 501 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 AC012531.5-201ENST00000611375 151 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC8P31273 AC091931.1-201ENST00000623488 728 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 AC116096.1-201ENST00000566804 2314 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HOXC8P31273 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
HOXC8P31273 AC066616.2-201ENST00000559334 1481 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HOXC8P31273 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXC8P31273 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXC8P31273 AC015813.6-201ENST00000624409 5808 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
HOXC8P31273 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC8P31273 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC8P31273 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXC8P31273 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXC8P31273 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC8P31273 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXC8P31273 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC8P31273 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC8P31273 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
HOXC8P31273 RNU6-553P-201ENST00000364047 96 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 RNU5A-2P-201ENST00000384337 116 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 AL021407.1-201ENST00000404531 386 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 MIR1183-201ENST00000408856 89 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 AC006989.1-201ENST00000427212 131 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 MTND4LP10-201ENST00000435146 291 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXC8P31273 AC091862.1-201ENST00000438016 1100 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 MTND2P20-201ENST00000440805 661 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXC8P31273 MTCYBP3-201ENST00000445588 1137 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 AL606662.1-201ENST00000445763 553 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 MTND2P19-201ENST00000449129 1012 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 USP9YP34-201ENST00000453983 808 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXC8P31273 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXC8P31273 RPS15AP17-201ENST00000470598 390 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 RN7SL504P-201ENST00000494496 287 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 HMGB1P22-201ENST00000505315 124 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 XKRY-201ENST00000510392 1100 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXC8P31273 RN7SKP31-201ENST00000516354 278 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXC8P31273 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXC8P31273 HSPE1P3-201ENST00000559254 309 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 MTCYBP33-201ENST00000575007 1130 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 OR4K7P-201ENST00000580232 945 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXC8P31273 MIR4325-201ENST00000583049 90 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 MAGOH2P-202ENST00000584384 429 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 MIR4276-201ENST00000584832 70 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 VN1R90P-201ENST00000595717 726 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 AC006557.5-201ENST00000603126 811 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 AC105129.3-201ENST00000605455 485 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXC8P31273 AC122133.1-201ENST00000613964 233 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.77□□□□□ -1.81
HOXC8P31273 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
HOXC8P31273 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC8P31273 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXC8P31273 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXC8P31273 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC8P31273 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXC8P31273 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXC8P31273 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HOXC8P31273 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC8P31273 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC8P31273 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HOXC8P31273 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC8P31273 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HOXC8P31273 RNA5SP374-201ENST00000362939 125 ntBASIC3.76□□□□□ -1.81
HOXC8P31273 SNORD6-201ENST00000365444 73 ntBASIC3.76□□□□□ -1.81
HOXC8P31273 SNORD116-9-201ENST00000384000 95 ntBASIC3.76□□□□□ -1.81
HOXC8P31273 SNORD116-3-201ENST00000384287 95 ntBASIC3.76□□□□□ -1.81
HOXC8P31273 SNORD51-201ENST00000384320 80 ntBASIC3.76□□□□□ -1.81
HOXC8P31273 SNORD116-7-201ENST00000384404 95 ntBASIC3.76□□□□□ -1.81
HOXC8P31273 SNORD116-5-201ENST00000384462 95 ntBASIC3.76□□□□□ -1.81
HOXC8P31273 MIR128-1-201ENST00000384921 82 ntBASIC3.76□□□□□ -1.81
HOXC8P31273 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC8P31273 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.76□□□□□ -1.81
HOXC8P31273 MORF4L1P6-201ENST00000418771 268 ntBASIC3.76□□□□□ -1.81
HOXC8P31273 SEPT2P1-201ENST00000419651 180 ntBASIC3.76□□□□□ -1.81
HOXC8P31273 AL159169.1-201ENST00000421119 127 ntBASIC3.76□□□□□ -1.81
HOXC8P31273 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXC8P31273 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXC8P31273 NANOGP6-201ENST00000429190 847 ntBASIC3.76□□□□□ -1.81
HOXC8P31273 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXC8P31273 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC8P31273 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXC8P31273 CEACAMP4-201ENST00000457676 421 ntBASIC3.76□□□□□ -1.81
HOXC8P31273 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXC8P31273 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXC8P31273 MLLT10P2-201ENST00000506434 249 ntBASIC3.76□□□□□ -1.81
HOXC8P31273 HSPE1P23-201ENST00000509838 286 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms