Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AP001094.1-201ENST00000579805 193 ntBASIC3.19□□□□□ -1.9
SHC1P29353 AC017100.2-201ENST00000584628 355 ntBASIC3.19□□□□□ -1.9
SHC1P29353 AC006116.10-201ENST00000591836 581 ntBASIC3.19□□□□□ -1.9
SHC1P29353 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.19□□□□□ -1.9
SHC1P29353 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHC1P29353 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.19□□□□□ -1.9
SHC1P29353 AC022149.2-201ENST00000621061 203 ntBASIC3.19□□□□□ -1.9
SHC1P29353 AL357559.1-201ENST00000622228 274 ntBASIC3.19□□□□□ -1.9
SHC1P29353 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.19□□□□□ -1.9
SHC1P29353 AL356596.1-201ENST00000624230 379 ntBASIC3.19□□□□□ -1.9
SHC1P29353 AC138649.5-201ENST00000637456 137 ntBASIC3.19□□□□□ -1.9
SHC1P29353 DBF4P1-201ENST00000412976 1892 ntBASIC3.19□□□□□ -1.9
SHC1P29353 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHC1P29353 AL161912.2-201ENST00000565707 3007 ntBASIC3.19□□□□□ -1.9
SHC1P29353 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.19□□□□□ -1.9
SHC1P29353 PABPC1P9-201ENST00000426076 1612 ntBASIC3.19□□□□□ -1.9
SHC1P29353 CR383658.2-201ENST00000547576 1525 ntBASIC3.19□□□□□ -1.9
SHC1P29353 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHC1P29353 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
SHC1P29353 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.18□□□□□ -1.9
SHC1P29353 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHC1P29353 ZNF37BP-203ENST00000452306 1352 ntBASIC3.18□□□□□ -1.9
SHC1P29353 SNRPEP3-201ENST00000338402 276 ntBASIC3.18□□□□□ -1.9
SHC1P29353 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHC1P29353 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SHC1P29353 Y_RNA.41-201ENST00000362646 102 ntBASIC3.18□□□□□ -1.9
SHC1P29353 RNA5SP167-201ENST00000365461 116 ntBASIC3.18□□□□□ -1.9
SHC1P29353 MIR23B-201ENST00000384832 97 ntBASIC3.18□□□□□ -1.9
SHC1P29353 MIR200C-201ENST00000384980 68 ntBASIC3.18□□□□□ -1.9
SHC1P29353 MIR670-201ENST00000390142 98 ntBASIC3.18□□□□□ -1.9
SHC1P29353 U3.39-201ENST00000408569 239 ntBASIC3.18□□□□□ -1.9
SHC1P29353 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.18□□□□□ -1.9
SHC1P29353 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.18□□□□□ -1.9
SHC1P29353 RPS29P4-201ENST00000414733 161 ntBASIC3.18□□□□□ -1.9
SHC1P29353 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.18□□□□□ -1.9
SHC1P29353 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.18□□□□□ -1.9
SHC1P29353 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.18□□□□□ -1.9
SHC1P29353 AC233981.1-201ENST00000423224 461 ntBASIC3.18□□□□□ -1.9
SHC1P29353 PSMA2P3-201ENST00000429685 675 ntBASIC3.18□□□□□ -1.9
SHC1P29353 ATP5JP1-201ENST00000431631 322 ntBASIC3.18□□□□□ -1.9
SHC1P29353 AC073063.1-201ENST00000434352 607 ntBASIC3.18□□□□□ -1.9
SHC1P29353 YWHAZP8-201ENST00000436935 731 ntBASIC3.18□□□□□ -1.9
SHC1P29353 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.18□□□□□ -1.9
SHC1P29353 EEF1E1P1-201ENST00000446998 430 ntBASIC3.18□□□□□ -1.9
SHC1P29353 HMGN2P21-201ENST00000447764 270 ntBASIC3.18□□□□□ -1.9
SHC1P29353 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.18□□□□□ -1.9
SHC1P29353 TRGVB-201ENST00000453257 471 ntBASIC3.18□□□□□ -1.9
SHC1P29353 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.18□□□□□ -1.9
SHC1P29353 AC087312.1-201ENST00000471411 480 ntBASIC3.18□□□□□ -1.9
SHC1P29353 AC025518.1-201ENST00000479856 347 ntBASIC3.18□□□□□ -1.9
SHC1P29353 AC013828.1-201ENST00000481845 158 ntBASIC3.18□□□□□ -1.9
SHC1P29353 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.18□□□□□ -1.9
SHC1P29353 AC011825.1-201ENST00000484967 388 ntBASIC3.18□□□□□ -1.9
SHC1P29353 AC107401.1-201ENST00000503426 685 ntBASIC3.18□□□□□ -1.9
SHC1P29353 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
SHC1P29353 TMEM248P1-201ENST00000510579 951 ntBASIC3.18□□□□□ -1.9
SHC1P29353 RNU6-579P-201ENST00000516879 102 ntBASIC3.18□□□□□ -1.9
SHC1P29353 DEFB131D-201ENST00000526803 184 ntBASIC3.18□□□□□ -1.9
SHC1P29353 AC087276.1-201ENST00000529659 480 ntBASIC3.18□□□□□ -1.9
SHC1P29353 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.18□□□□□ -1.9
SHC1P29353 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.18□□□□□ -1.9
SHC1P29353 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.18□□□□□ -1.9
SHC1P29353 AC006270.2-201ENST00000578523 652 ntBASIC3.18□□□□□ -1.9
SHC1P29353 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
SHC1P29353 SNORD39.3-201ENST00000584451 71 ntBASIC3.18□□□□□ -1.9
SHC1P29353 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.18□□□□□ -1.9
SHC1P29353 AC012065.4-201ENST00000602445 679 ntBASIC3.18□□□□□ -1.9
SHC1P29353 AC079089.3-201ENST00000603094 673 ntBASIC3.18□□□□□ -1.9
SHC1P29353 AC015871.2-201ENST00000603605 948 ntBASIC3.18□□□□□ -1.9
SHC1P29353 AL596327.1-201ENST00000603629 213 ntBASIC3.18□□□□□ -1.9
SHC1P29353 SNORA51-201ENST00000606420 132 ntBASIC3.18□□□□□ -1.9
SHC1P29353 AC107214.2-201ENST00000608204 634 ntBASIC3.18□□□□□ -1.9
SHC1P29353 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SHC1P29353 Z99129.1-201ENST00000612510 255 ntBASIC3.18□□□□□ -1.9
SHC1P29353 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.18□□□□□ -1.9
SHC1P29353 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.18□□□□□ -1.9
SHC1P29353 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.18□□□□□ -1.9
SHC1P29353 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHC1P29353 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SHC1P29353 AL365440.1-201ENST00000436135 2167 ntBASIC3.18□□□□□ -1.9
SHC1P29353 SAGE4P-201ENST00000442271 3381 ntBASIC3.18□□□□□ -1.9
SHC1P29353 AC058791.1-201ENST00000608412 3198 ntBASIC3.18□□□□□ -1.9
SHC1P29353 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHC1P29353 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.17□□□□□ -1.9
SHC1P29353 MTCO1P24-201ENST00000515438 1558 ntBASIC3.17□□□□□ -1.9
SHC1P29353 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SHC1P29353 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHC1P29353 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.17□□□□□ -1.9
SHC1P29353 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SHC1P29353 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SHC1P29353 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SHC1P29353 SNORA71.3-201ENST00000362582 128 ntBASIC3.17□□□□□ -1.9
SHC1P29353 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SHC1P29353 RNY3P10-201ENST00000384764 102 ntBASIC3.17□□□□□ -1.9
SHC1P29353 BTBD10P2-201ENST00000404779 676 ntBASIC3.17□□□□□ -1.9
SHC1P29353 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.17□□□□□ -1.9
SHC1P29353 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.17□□□□□ -1.9
SHC1P29353 CKS1BP5-201ENST00000434172 273 ntBASIC3.17□□□□□ -1.9
SHC1P29353 MRPS18BP2-201ENST00000434310 759 ntBASIC3.17□□□□□ -1.9
SHC1P29353 MTND1P28-201ENST00000435623 950 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms