Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC021146.5-201ENST00000503544 545 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 UBE2V1P12-201ENST00000503954 474 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 TXNP6-201ENST00000510190 310 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN6P29350 AC074250.1-201ENST00000511117 192 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 RNY4P37-201ENST00000516225 96 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN6P29350 AC068657.1-201ENST00000520807 306 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN6P29350 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN6P29350 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.14□□□□□ -1.91
PTPN6P29350 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN6P29350 MED28P6-201ENST00000558776 231 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 AC023813.2-201ENST00000564321 469 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN6P29350 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN6P29350 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN6P29350 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN6P29350 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN6P29350 MTND3P19-201ENST00000603825 345 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 AL022099.1-201ENST00000604551 712 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 AC106900.2-201ENST00000604994 317 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 RNU4-5P-201ENST00000607255 135 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 AP002826.1-201ENST00000608835 315 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 AC231657.1-201ENST00000624313 397 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 AC093010.3-201ENST00000570269 15214 ntBASIC3.14□□□□□ -1.91
PTPN6P29350 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.13□□□□□ -1.91
PTPN6P29350 AC073346.2-201ENST00000624724 2058 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 AL079343.1-201ENST00000572358 1771 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.13□□□□□ -1.91
PTPN6P29350 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.13□□□□□ -1.91
PTPN6P29350 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.13□□□□□ -1.91
PTPN6P29350 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTPN6P29350 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTPN6P29350 RNA5SP383-201ENST00000362934 120 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 RNU6-525P-201ENST00000363685 104 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 Y_RNA.465-201ENST00000384293 102 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 MIR483-201ENST00000385070 76 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 RPL17P50-201ENST00000396131 546 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 RNA5SP38-201ENST00000410750 119 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 MRPL50P2-201ENST00000416821 482 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPN6P29350 AC006960.1-201ENST00000419980 153 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 AC092648.1-201ENST00000425870 423 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPN6P29350 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPN6P29350 USP9YP24-201ENST00000434374 697 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 USP9YP17-201ENST00000444617 696 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 AC092155.2-201ENST00000454675 477 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPN6P29350 AC104472.2-201ENST00000469035 601 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 AP002884.2-201ENST00000471647 395 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 AC068724.1-201ENST00000487100 792 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 RPL7P38-201ENST00000488396 739 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.13□□□□□ -1.91
PTPN6P29350 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPN6P29350 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPN6P29350 FCF1P8-201ENST00000510322 597 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 SNORA70.24-201ENST00000517233 118 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPN6P29350 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.13□□□□□ -1.91
PTPN6P29350 AL512347.1-201ENST00000566420 503 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 AC005951.1-201ENST00000576706 485 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 OR4K7P-201ENST00000580232 945 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPN6P29350 AP001269.3-201ENST00000588718 329 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.13□□□□□ -1.91
PTPN6P29350 DUXAP3-201ENST00000603616 594 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 AC012443.1-201ENST00000605605 231 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.13□□□□□ -1.91
PTPN6P29350 AC109809.1-201ENST00000619665 545 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.13□□□□□ -1.91
PTPN6P29350 OR5BR1P-201ENST00000524992 1330 ntBASIC3.13□□□□□ -1.91
PTPN6P29350 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PTPN6P29350 AC092435.3-201ENST00000565538 3654 ntBASIC3.12□□□□□ -1.91
PTPN6P29350 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTPN6P29350 AL390862.1-201ENST00000635467 1469 ntBASIC3.12□□□□□ -1.91
PTPN6P29350 U3.11-201ENST00000364476 212 ntBASIC3.12□□□□□ -1.91
PTPN6P29350 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.12□□□□□ -1.91
PTPN6P29350 SNORA9-201ENST00000384215 133 ntBASIC3.12□□□□□ -1.91
PTPN6P29350 MIR491-201ENST00000384877 84 ntBASIC3.12□□□□□ -1.91
PTPN6P29350 HMGB1P17-201ENST00000403495 628 ntBASIC3.12□□□□□ -1.91
PTPN6P29350 U3.42-201ENST00000408746 214 ntBASIC3.12□□□□□ -1.91
PTPN6P29350 HSFY4P-201ENST00000415994 1181 ntBASIC3.12□□□□□ -1.91
PTPN6P29350 SSXP9-201ENST00000417503 292 ntBASIC3.12□□□□□ -1.91
PTPN6P29350 AL513175.2-201ENST00000422071 443 ntBASIC3.12□□□□□ -1.91
PTPN6P29350 MTCO2P5-201ENST00000422621 426 ntBASIC3.12□□□□□ -1.91
PTPN6P29350 NANOGP5-201ENST00000424456 877 ntBASIC3.12□□□□□ -1.91
PTPN6P29350 MTCO2P23-201ENST00000425216 680 ntBASIC3.12□□□□□ -1.91
PTPN6P29350 AC005019.1-201ENST00000436455 431 ntBASIC3.12□□□□□ -1.91
PTPN6P29350 SDCBPP1-201ENST00000440192 890 ntBASIC3.12□□□□□ -1.91
PTPN6P29350 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPN6P29350 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPN6P29350 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPN6P29350 AL353691.1-201ENST00000451332 387 ntBASIC3.12□□□□□ -1.91
PTPN6P29350 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.12□□□□□ -1.91
PTPN6P29350 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPN6P29350 RPS27P29-201ENST00000463110 252 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms