Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
EPHA3P29320 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.05□□□□□ -1.76
EPHA3P29320 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.05□□□□□ -1.76
EPHA3P29320 uc_338.12-201ENST00000616344 181 ntBASIC4.05□□□□□ -1.76
EPHA3P29320 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
EPHA3P29320 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.05□□□□□ -1.76
EPHA3P29320 AC091953.3-201ENST00000623220 236 ntBASIC4.05□□□□□ -1.76
EPHA3P29320 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.05□□□□□ -1.76
EPHA3P29320 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
EPHA3P29320 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
EPHA3P29320 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
EPHA3P29320 AC009951.1-201ENST00000623674 2614 ntBASIC4.05□□□□□ -1.76
EPHA3P29320 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
EPHA3P29320 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
EPHA3P29320 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.04□□□□□ -1.76
EPHA3P29320 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.04□□□□□ -1.76
EPHA3P29320 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
EPHA3P29320 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.04□□□□□ -1.76
EPHA3P29320 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
EPHA3P29320 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
EPHA3P29320 RNA5SP502-201ENST00000362694 119 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 RNU6-1085P-201ENST00000363576 107 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 RNY4P14-201ENST00000363656 96 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
EPHA3P29320 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
EPHA3P29320 Y_RNA.402-201ENST00000383972 102 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 RNU1-89P-201ENST00000384592 164 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
EPHA3P29320 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 HMGN1P24-201ENST00000412282 298 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 RPEP3-201ENST00000425462 676 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.04□□□□□ -1.76
EPHA3P29320 AL360081.1-201ENST00000428299 555 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 USP9YP9-201ENST00000429406 715 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.04□□□□□ -1.76
EPHA3P29320 RPL23AP30-201ENST00000432419 501 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 AC000111.3-201ENST00000433478 193 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.04□□□□□ -1.76
EPHA3P29320 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.04□□□□□ -1.76
EPHA3P29320 AL662791.1-201ENST00000441992 928 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 MTND2P24-201ENST00000453434 806 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 MTCO2P29-201ENST00000465212 189 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.04□□□□□ -1.76
EPHA3P29320 AC079382.1-201ENST00000493346 557 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.04□□□□□ -1.76
EPHA3P29320 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.04□□□□□ -1.76
EPHA3P29320 AC114797.1-201ENST00000514003 728 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 RNU4-60P-201ENST00000517239 135 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.04□□□□□ -1.76
EPHA3P29320 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.04□□□□□ -1.76
EPHA3P29320 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.04□□□□□ -1.76
EPHA3P29320 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.04□□□□□ -1.76
EPHA3P29320 AP006289.1-201ENST00000538089 277 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 AC126177.3-201ENST00000551839 688 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 AL512360.1-201ENST00000555346 234 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.04□□□□□ -1.76
EPHA3P29320 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.04□□□□□ -1.76
EPHA3P29320 AC006504.3-201ENST00000586818 523 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 AL158211.4-201ENST00000606988 584 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 AP001596.2-201ENST00000608410 312 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 AC128687.2-201ENST00000609657 566 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 AL136295.6-201ENST00000610486 658 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 MIR6820-201ENST00000611508 62 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 AC140479.6-201ENST00000633535 357 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 AL773545.4-201ENST00000637262 310 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 AL513478.4-201ENST00000641636 310 ntBASIC4.04□□□□□ -1.76
EPHA3P29320 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
EPHA3P29320 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
EPHA3P29320 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
EPHA3P29320 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
EPHA3P29320 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.03□□□□□ -1.76
EPHA3P29320 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
EPHA3P29320 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
EPHA3P29320 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
EPHA3P29320 Y_RNA.381-201ENST00000365666 102 ntBASIC4.03□□□□□ -1.76
EPHA3P29320 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.03□□□□□ -1.76
EPHA3P29320 Y_RNA.390-201ENST00000383932 102 ntBASIC4.03□□□□□ -1.76
EPHA3P29320 AC068050.1-201ENST00000394891 380 ntBASIC4.03□□□□□ -1.76
EPHA3P29320 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
EPHA3P29320 RNA5SP36-201ENST00000410197 133 ntBASIC4.03□□□□□ -1.76
EPHA3P29320 RNU6-712P-201ENST00000410558 100 ntBASIC4.03□□□□□ -1.76
EPHA3P29320 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.03□□□□□ -1.76
EPHA3P29320 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.03□□□□□ -1.76
EPHA3P29320 HMGB3P20-201ENST00000417997 600 ntBASIC4.03□□□□□ -1.76
EPHA3P29320 BTF3P10-201ENST00000433415 495 ntBASIC4.03□□□□□ -1.76
EPHA3P29320 ARL2BPP10-201ENST00000446487 531 ntBASIC4.03□□□□□ -1.76
EPHA3P29320 PPIAP3-201ENST00000450588 505 ntBASIC4.03□□□□□ -1.76
EPHA3P29320 NANOGP10-201ENST00000453325 895 ntBASIC4.03□□□□□ -1.76
EPHA3P29320 MTND1P9-201ENST00000453775 944 ntBASIC4.03□□□□□ -1.76
EPHA3P29320 AC007967.1-201ENST00000455422 1159 ntBASIC4.03□□□□□ -1.76
EPHA3P29320 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.03□□□□□ -1.76
EPHA3P29320 RPS29P22-201ENST00000472363 168 ntBASIC4.03□□□□□ -1.76
EPHA3P29320 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
EPHA3P29320 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.03□□□□□ -1.76
EPHA3P29320 RNA5SP73-201ENST00000516744 108 ntBASIC4.03□□□□□ -1.76
EPHA3P29320 IGLVIV-65-201ENST00000517313 360 ntBASIC4.03□□□□□ -1.76
EPHA3P29320 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.03□□□□□ -1.76
EPHA3P29320 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.03□□□□□ -1.76
EPHA3P29320 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.03□□□□□ -1.76
EPHA3P29320 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms