Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.39□□□□□ -1.71
POLR2AP24928 SAR1AP4-201ENST00000429225 591 ntBASIC4.39□□□□□ -1.71
POLR2AP24928 MTCYBP45-201ENST00000435243 565 ntBASIC4.39□□□□□ -1.71
POLR2AP24928 AC016691.1-201ENST00000441321 413 ntBASIC4.39□□□□□ -1.71
POLR2AP24928 GEMIN8P3-201ENST00000445417 720 ntBASIC4.39□□□□□ -1.71
POLR2AP24928 RPL37P3-201ENST00000456825 293 ntBASIC4.39□□□□□ -1.71
POLR2AP24928 AC023598.1-201ENST00000472521 361 ntBASIC4.39□□□□□ -1.71
POLR2AP24928 RPS27P23-201ENST00000487608 251 ntBASIC4.39□□□□□ -1.71
POLR2AP24928 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
POLR2AP24928 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.39□□□□□ -1.71
POLR2AP24928 RN7SKP46-201ENST00000515942 234 ntBASIC4.39□□□□□ -1.71
POLR2AP24928 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.39□□□□□ -1.71
POLR2AP24928 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.39□□□□□ -1.71
POLR2AP24928 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
POLR2AP24928 AC008083.2-201ENST00000546707 476 ntBASIC4.39□□□□□ -1.71
POLR2AP24928 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.39□□□□□ -1.71
POLR2AP24928 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.39□□□□□ -1.71
POLR2AP24928 HMGN1P30-201ENST00000589286 268 ntBASIC4.39□□□□□ -1.71
POLR2AP24928 NRBF2P5-201ENST00000603087 788 ntBASIC4.39□□□□□ -1.71
POLR2AP24928 AC008250.2-201ENST00000615261 205 ntBASIC4.39□□□□□ -1.71
POLR2AP24928 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
POLR2AP24928 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
POLR2AP24928 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
POLR2AP24928 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
POLR2AP24928 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
POLR2AP24928 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
POLR2AP24928 SNORD56.2-201ENST00000363242 71 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 U8.14-201ENST00000390843 143 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 MTCO3P40-201ENST00000392516 676 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 RNU6-373P-201ENST00000411247 98 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 DPPA2P2-201ENST00000418220 897 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.38□□□□□ -1.71
POLR2AP24928 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.38□□□□□ -1.71
POLR2AP24928 RPS24P8-201ENST00000431490 402 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 RPL23AP16-201ENST00000441715 421 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 MTCO1P27-201ENST00000448269 226 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.38□□□□□ -1.71
POLR2AP24928 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.38□□□□□ -1.71
POLR2AP24928 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.38□□□□□ -1.71
POLR2AP24928 AC108078.3-201ENST00000502633 489 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.38□□□□□ -1.71
POLR2AP24928 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.38□□□□□ -1.71
POLR2AP24928 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.38□□□□□ -1.71
POLR2AP24928 AP003034.1-201ENST00000534621 422 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 AL512310.1-201ENST00000548639 172 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 AL359212.1-201ENST00000556608 614 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 AL035413.2-201ENST00000604801 525 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 AL137843.1-201ENST00000605078 385 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 AC002550.2-201ENST00000621246 394 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 U4.6-201ENST00000621618 127 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.38□□□□□ -1.71
POLR2AP24928 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
POLR2AP24928 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
POLR2AP24928 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
POLR2AP24928 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
POLR2AP24928 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.38□□□□□ -1.71
POLR2AP24928 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.38□□□□□ -1.71
POLR2AP24928 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
POLR2AP24928 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
POLR2AP24928 SNORD17-201ENST00000390930 237 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 AL031121.1-201ENST00000406553 254 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.38□□□□□ -1.71
POLR2AP24928 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.38□□□□□ -1.71
POLR2AP24928 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.38□□□□□ -1.71
POLR2AP24928 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.38□□□□□ -1.71
POLR2AP24928 MTCO3P46-201ENST00000425787 232 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.38□□□□□ -1.71
POLR2AP24928 RPS26P40-201ENST00000435209 294 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 YWHAQP9-201ENST00000445891 512 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 AL031584.1-201ENST00000447169 754 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 MTND1P12-201ENST00000455231 147 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 OR6K1P-201ENST00000456766 971 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 RPS3AP14-201ENST00000483907 780 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 AC026412.2-201ENST00000512270 1075 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 AC010493.1-201ENST00000513479 292 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.38□□□□□ -1.71
POLR2AP24928 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.38□□□□□ -1.71
POLR2AP24928 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.38□□□□□ -1.71
POLR2AP24928 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.38□□□□□ -1.71
POLR2AP24928 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.38□□□□□ -1.71
POLR2AP24928 AC093519.1-201ENST00000566109 298 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.38□□□□□ -1.71
POLR2AP24928 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.38□□□□□ -1.71
POLR2AP24928 AC010591.1-201ENST00000603941 649 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 AC013553.2-201ENST00000604244 589 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 RNU6-87P-201ENST00000607561 108 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 AC104010.1-201ENST00000616889 150 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 U6.101-201ENST00000637707 76 ntBASIC4.38□□□□□ -1.71
POLR2AP24928 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
POLR2AP24928 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
POLR2AP24928 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
POLR2AP24928 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
POLR2AP24928 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
POLR2AP24928 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
POLR2AP24928 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
POLR2AP24928 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
POLR2AP24928 RNU6-223P-201ENST00000362830 107 ntBASIC4.37□□□□□ -1.71
POLR2AP24928 Y_RNA.142-201ENST00000363491 102 ntBASIC4.37□□□□□ -1.71
POLR2AP24928 RNU6-108P-201ENST00000365558 107 ntBASIC4.37□□□□□ -1.71
POLR2AP24928 RNU6-738P-201ENST00000384531 106 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms