Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC022364.2-201ENST00000457963 554 ntBASIC3.95□□□□□ -1.78
TNFSF4P23510 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.95□□□□□ -1.78
TNFSF4P23510 RPL31P60-201ENST00000478450 367 ntBASIC3.95□□□□□ -1.78
TNFSF4P23510 RPL36AP41-201ENST00000493820 306 ntBASIC3.95□□□□□ -1.78
TNFSF4P23510 SCARNA24.1-201ENST00000516465 137 ntBASIC3.95□□□□□ -1.78
TNFSF4P23510 RNU6-1220P-201ENST00000517126 108 ntBASIC3.95□□□□□ -1.78
TNFSF4P23510 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.95□□□□□ -1.78
TNFSF4P23510 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.95□□□□□ -1.78
TNFSF4P23510 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.95□□□□□ -1.78
TNFSF4P23510 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.95□□□□□ -1.78
TNFSF4P23510 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.95□□□□□ -1.78
TNFSF4P23510 SYF2P1-201ENST00000550658 413 ntBASIC3.95□□□□□ -1.78
TNFSF4P23510 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TNFSF4P23510 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.95□□□□□ -1.78
TNFSF4P23510 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.95□□□□□ -1.78
TNFSF4P23510 AC098848.2-201ENST00000588023 330 ntBASIC3.95□□□□□ -1.78
TNFSF4P23510 AL031666.3-201ENST00000609320 1006 ntBASIC3.95□□□□□ -1.78
TNFSF4P23510 MIR6820-201ENST00000611508 62 ntBASIC3.95□□□□□ -1.78
TNFSF4P23510 AC026368.1-201ENST00000614934 690 ntBASIC3.95□□□□□ -1.78
TNFSF4P23510 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.95□□□□□ -1.78
TNFSF4P23510 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TNFSF4P23510 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TNFSF4P23510 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
TNFSF4P23510 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.95□□□□□ -1.78
TNFSF4P23510 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TNFSF4P23510 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
TNFSF4P23510 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.94□□□□□ -1.78
TNFSF4P23510 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TNFSF4P23510 OR4K15-201ENST00000305051 1216 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
TNFSF4P23510 RNU6-456P-201ENST00000384493 107 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 MIR3074-201ENST00000384885 81 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TNFSF4P23510 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.94□□□□□ -1.78
TNFSF4P23510 UQCRBP1-201ENST00000421129 336 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TNFSF4P23510 MTND3P21-201ENST00000433774 331 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 HMGB3P12-201ENST00000438745 556 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.94□□□□□ -1.78
TNFSF4P23510 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TNFSF4P23510 AL513533.1-201ENST00000453728 415 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 HMGN2P7-201ENST00000456186 273 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 AL445433.1-201ENST00000457507 257 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.94□□□□□ -1.78
TNFSF4P23510 RPL9P6-201ENST00000492764 598 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.94□□□□□ -1.78
TNFSF4P23510 HMGB3P15-201ENST00000507326 574 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 STMN1P2-201ENST00000508435 439 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.94□□□□□ -1.78
TNFSF4P23510 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.94□□□□□ -1.78
TNFSF4P23510 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.94□□□□□ -1.78
TNFSF4P23510 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.94□□□□□ -1.78
TNFSF4P23510 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.94□□□□□ -1.78
TNFSF4P23510 HIGD1AP5-201ENST00000529959 259 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 AP006289.1-201ENST00000538089 277 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.94□□□□□ -1.78
TNFSF4P23510 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.94□□□□□ -1.78
TNFSF4P23510 SUB1P2-201ENST00000556401 297 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.94□□□□□ -1.78
TNFSF4P23510 AC209154.1-201ENST00000582156 337 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 AC069061.3-201ENST00000582254 823 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.94□□□□□ -1.78
TNFSF4P23510 AC002545.1-201ENST00000592511 181 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.94□□□□□ -1.78
TNFSF4P23510 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.94□□□□□ -1.78
TNFSF4P23510 AC012531.5-201ENST00000611375 151 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 uc_338.18-201ENST00000615451 175 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 AC090132.2-201ENST00000615881 347 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 SNX18P1Y-201ENST00000616231 511 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 RN7SL722P-201ENST00000617780 284 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 RN7SL565P-201ENST00000618246 284 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
TNFSF4P23510 AP005019.3-201ENST00000620418 560 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 AC091905.1-201ENST00000624400 311 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.94□□□□□ -1.78
TNFSF4P23510 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TNFSF4P23510 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.94□□□□□ -1.78
TNFSF4P23510 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TNFSF4P23510 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC3.94□□□□□ -1.78
TNFSF4P23510 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.94□□□□□ -1.78
TNFSF4P23510 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TNFSF4P23510 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
TNFSF4P23510 AC010928.1-201ENST00000592477 1447 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.94□□□□□ -1.78
TNFSF4P23510 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
TNFSF4P23510 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
TNFSF4P23510 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
TNFSF4P23510 AC125257.1-201ENST00000560400 2930 ntBASIC3.94□□□□□ -1.78
TNFSF4P23510 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
TNFSF4P23510 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.93□□□□□ -1.78
TNFSF4P23510 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.93□□□□□ -1.78
TNFSF4P23510 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
TNFSF4P23510 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TNFSF4P23510 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
TNFSF4P23510 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TNFSF4P23510 RNA5SP397-201ENST00000391323 118 ntBASIC3.93□□□□□ -1.78
TNFSF4P23510 AL592291.1-201ENST00000403830 352 ntBASIC3.93□□□□□ -1.78
TNFSF4P23510 ARL4AP5-201ENST00000404372 599 ntBASIC3.93□□□□□ -1.78
TNFSF4P23510 U3.42-201ENST00000408746 214 ntBASIC3.93□□□□□ -1.78
TNFSF4P23510 RNU4-55P-201ENST00000410731 137 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms