Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DPA1P20036 AC011611.1-201ENST00000552179 197 ntBASIC3.35□□□□□ -1.87
HLA-DPA1P20036 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DPA1P20036 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DPA1P20036 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.35□□□□□ -1.87
HLA-DPA1P20036 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DPA1P20036 BNIP3P22-201ENST00000593399 556 ntBASIC3.35□□□□□ -1.87
HLA-DPA1P20036 BBIP1P1-201ENST00000602999 279 ntBASIC3.35□□□□□ -1.87
HLA-DPA1P20036 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-DPA1P20036 MIR7975-201ENST00000619350 68 ntBASIC3.35□□□□□ -1.87
HLA-DPA1P20036 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-DPA1P20036 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-DPA1P20036 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-DPA1P20036 MTND5P24-201ENST00000438892 1767 ntBASIC3.35□□□□□ -1.87
HLA-DPA1P20036 AC005832.2-201ENST00000538921 1430 ntBASIC3.35□□□□□ -1.87
HLA-DPA1P20036 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-DPA1P20036 Z83843.1-201ENST00000604070 3685 ntBASIC3.34□□□□□ -1.87
HLA-DPA1P20036 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DPA1P20036 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.34□□□□□ -1.87
HLA-DPA1P20036 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.34□□□□□ -1.87
HLA-DPA1P20036 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DPA1P20036 RNU6-799P-201ENST00000363567 107 ntBASIC3.34□□□□□ -1.87
HLA-DPA1P20036 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DPA1P20036 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DPA1P20036 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DPA1P20036 MIR34B-201ENST00000385076 84 ntBASIC3.34□□□□□ -1.87
HLA-DPA1P20036 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DPA1P20036 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DPA1P20036 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DPA1P20036 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DPA1P20036 SNRPGP6-201ENST00000451124 220 ntBASIC3.34□□□□□ -1.87
HLA-DPA1P20036 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.34□□□□□ -1.87
HLA-DPA1P20036 BX322784.1-201ENST00000455793 1077 ntBASIC3.34□□□□□ -1.87
HLA-DPA1P20036 HMGN1P18-201ENST00000457642 277 ntBASIC3.34□□□□□ -1.87
HLA-DPA1P20036 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DPA1P20036 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DPA1P20036 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.34□□□□□ -1.87
HLA-DPA1P20036 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.34□□□□□ -1.87
HLA-DPA1P20036 RNU6-798P-201ENST00000516912 103 ntBASIC3.34□□□□□ -1.87
HLA-DPA1P20036 AP000867.2-201ENST00000532468 320 ntBASIC3.34□□□□□ -1.87
HLA-DPA1P20036 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.34□□□□□ -1.87
HLA-DPA1P20036 AC125611.2-201ENST00000551907 647 ntBASIC3.34□□□□□ -1.87
HLA-DPA1P20036 NCAPGP2-201ENST00000557911 754 ntBASIC3.34□□□□□ -1.87
HLA-DPA1P20036 MIR3609-201ENST00000582661 80 ntBASIC3.34□□□□□ -1.87
HLA-DPA1P20036 uc_338.1-201ENST00000612113 180 ntBASIC3.34□□□□□ -1.87
HLA-DPA1P20036 AC006213.4-201ENST00000616184 634 ntBASIC3.34□□□□□ -1.87
HLA-DPA1P20036 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DPA1P20036 AL445264.1-201ENST00000621719 171 ntBASIC3.34□□□□□ -1.87
HLA-DPA1P20036 AC008443.7-201ENST00000622195 246 ntBASIC3.34□□□□□ -1.87
HLA-DPA1P20036 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
HLA-DPA1P20036 ZNF826P-207ENST00000622273 1910 ntBASIC3.34□□□□□ -1.88
HLA-DPA1P20036 AL079305.1-201ENST00000623159 3008 ntBASIC3.34□□□□□ -1.88
HLA-DPA1P20036 AL390862.1-201ENST00000635467 1469 ntBASIC3.34□□□□□ -1.88
HLA-DPA1P20036 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
HLA-DPA1P20036 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HLA-DPA1P20036 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DPA1P20036 Y_RNA.234-201ENST00000364409 97 ntBASIC3.33□□□□□ -1.88
HLA-DPA1P20036 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DPA1P20036 RNU6-1027P-201ENST00000383998 107 ntBASIC3.33□□□□□ -1.88
HLA-DPA1P20036 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HLA-DPA1P20036 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DPA1P20036 AC234781.2-201ENST00000426370 994 ntBASIC3.33□□□□□ -1.88
HLA-DPA1P20036 AC090774.1-201ENST00000435925 246 ntBASIC3.33□□□□□ -1.88
HLA-DPA1P20036 CST9LP2-201ENST00000437612 320 ntBASIC3.33□□□□□ -1.88
HLA-DPA1P20036 Z99127.3-201ENST00000448158 395 ntBASIC3.33□□□□□ -1.88
HLA-DPA1P20036 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DPA1P20036 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DPA1P20036 RPL31P50-201ENST00000471002 296 ntBASIC3.33□□□□□ -1.88
HLA-DPA1P20036 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DPA1P20036 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DPA1P20036 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DPA1P20036 AC021451.1-201ENST00000523498 1129 ntBASIC3.33□□□□□ -1.88
HLA-DPA1P20036 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DPA1P20036 AC004024.1-201ENST00000549244 247 ntBASIC3.33□□□□□ -1.88
HLA-DPA1P20036 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DPA1P20036 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DPA1P20036 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DPA1P20036 AC079089.3-201ENST00000603094 673 ntBASIC3.33□□□□□ -1.88
HLA-DPA1P20036 NUTF2P8-201ENST00000604593 363 ntBASIC3.33□□□□□ -1.88
HLA-DPA1P20036 AC073657.2-201ENST00000605661 303 ntBASIC3.33□□□□□ -1.88
HLA-DPA1P20036 AL121652.1-201ENST00000608851 448 ntBASIC3.33□□□□□ -1.88
HLA-DPA1P20036 AC008121.2-201ENST00000614647 523 ntBASIC3.33□□□□□ -1.88
HLA-DPA1P20036 MIR6130-201ENST00000619419 109 ntBASIC3.33□□□□□ -1.88
HLA-DPA1P20036 AC002550.2-201ENST00000621246 394 ntBASIC3.33□□□□□ -1.88
HLA-DPA1P20036 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DPA1P20036 AC073476.4-201ENST00000628409 72 ntBASIC3.33□□□□□ -1.88
HLA-DPA1P20036 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DPA1P20036 RIOK3P1-201ENST00000418778 1528 ntBASIC3.33□□□□□ -1.88
HLA-DPA1P20036 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DPA1P20036 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DPA1P20036 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DPA1P20036 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.32□□□□□ -1.88
HLA-DPA1P20036 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DPA1P20036 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DPA1P20036 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DPA1P20036 RNU1-70P-201ENST00000362618 164 ntBASIC3.32□□□□□ -1.88
HLA-DPA1P20036 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DPA1P20036 AC097713.2-201ENST00000430199 356 ntBASIC3.32□□□□□ -1.88
HLA-DPA1P20036 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DPA1P20036 HMGB3P11-201ENST00000440127 604 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms