Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.74□□□□□ -1.65
PTPN1P18031 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
PTPN1P18031 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTPN1P18031 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PTPN1P18031 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PTPN1P18031 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTPN1P18031 SAGE2P-201ENST00000420011 2126 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 AC000123.3-201ENST00000624029 4975 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PTPN1P18031 OR4G1P-203ENST00000641984 1631 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
PTPN1P18031 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.73□□□□□ -1.65
PTPN1P18031 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTPN1P18031 Y_RNA.460-201ENST00000384255 102 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PTPN1P18031 RNU6-332P-201ENST00000391193 108 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTPN1P18031 FAT1P1-201ENST00000406588 507 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 AC009161.1-201ENST00000417306 376 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PTPN1P18031 RPL30P3-201ENST00000424262 333 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 PTMAP3-201ENST00000447474 330 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 MTND1P9-201ENST00000453775 944 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 RPL23AP24-201ENST00000458203 385 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 AC011276.1-201ENST00000469688 323 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 NIP7P2-201ENST00000485801 544 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 DEFB109F-201ENST00000491870 277 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 NIPA2P2-201ENST00000496376 1083 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.73□□□□□ -1.65
PTPN1P18031 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PTPN1P18031 AC114797.1-201ENST00000514003 728 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 RNA5SP497-201ENST00000516081 97 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 RNU6-27P-201ENST00000516146 107 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 RNU6-1153P-201ENST00000516760 105 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 RN7SKP82-201ENST00000516786 223 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 Y_RNA.701-201ENST00000516812 110 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 RN7SKP277-201ENST00000516895 283 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.73□□□□□ -1.65
PTPN1P18031 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.73□□□□□ -1.65
PTPN1P18031 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.73□□□□□ -1.65
PTPN1P18031 AC023050.3-201ENST00000541142 333 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.73□□□□□ -1.65
PTPN1P18031 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.73□□□□□ -1.65
PTPN1P18031 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.73□□□□□ -1.65
PTPN1P18031 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.73□□□□□ -1.65
PTPN1P18031 AC004908.2-201ENST00000609090 574 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 AL442067.2-201ENST00000614033 363 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 AC002550.2-201ENST00000621246 394 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 AC244100.1-202ENST00000621554 382 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 AC090574.1-201ENST00000623186 233 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 AC005858.4-201ENST00000623191 700 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 AC091925.2-201ENST00000625059 256 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.73□□□□□ -1.65
PTPN1P18031 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PTPN1P18031 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PTPN1P18031 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTPN1P18031 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.73□□□□□ -1.65
PTPN1P18031 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
PTPN1P18031 AL450326.2-201ENST00000421913 1962 ntBASIC4.73□□□□□ -1.65
PTPN1P18031 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTPN1P18031 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN1P18031 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN1P18031 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN1P18031 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PTPN1P18031 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
PTPN1P18031 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PTPN1P18031 Y_RNA.22-201ENST00000362492 102 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 RNU4-79P-201ENST00000362764 141 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 U3.11-201ENST00000364476 212 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 RNU1-63P-201ENST00000383902 164 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 RNU6-178P-201ENST00000384631 104 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 MIR3065-201ENST00000390137 79 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 RNU6-278P-201ENST00000390945 109 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 RN7SKP32-201ENST00000410167 303 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 AL139095.3-201ENST00000419672 1203 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.72□□□□□ -1.65
PTPN1P18031 MTCO3P46-201ENST00000425787 232 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.72□□□□□ -1.65
PTPN1P18031 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.72□□□□□ -1.65
PTPN1P18031 SRIP2-201ENST00000428470 166 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 AC011998.1-201ENST00000433403 117 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.72□□□□□ -1.65
PTPN1P18031 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN1P18031 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.72□□□□□ -1.65
PTPN1P18031 AC073415.1-201ENST00000449240 153 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.72□□□□□ -1.65
PTPN1P18031 DHFRP3-201ENST00000455595 559 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.72□□□□□ -1.65
PTPN1P18031 GMFBP1-201ENST00000467831 427 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 RN7SL810P-201ENST00000493031 276 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 RNA5SP360-201ENST00000516555 118 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.72□□□□□ -1.65
PTPN1P18031 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.72□□□□□ -1.65
PTPN1P18031 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.72□□□□□ -1.65
PTPN1P18031 AC078814.3-201ENST00000553036 491 ntBASIC4.72□□□□□ -1.65
PTPN1P18031 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.72□□□□□ -1.65
PTPN1P18031 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.72□□□□□ -1.65
PTPN1P18031 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.72□□□□□ -1.65
PTPN1P18031 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.72□□□□□ -1.65
PTPN1P18031 MIR4512-201ENST00000583257 77 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms